RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 POLR3HQ9Y535 204 aaPredicted RBP9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 CLDN16Q9Y5I7 305 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 DOCK10Q96BY6 2186 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 OR2W5A6NFC9 320 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 MYO1GB0I1T2 1018 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 POLR3GO15318 223 aaPredicted RBP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 ITM2AO43736 263 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 ITGA10O75578 1167 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 WDPCPO95876 746 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 TROVE2P10155 538 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 SDC1P18827 310 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 GPC1P35052 558 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 FEN1P39748 380 aaKnown RBP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 MAGEA8P43361 318 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 ANXA11P50995 505 aaKnown RBP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 NCBP2P52298 156 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 CLDN8P56748 225 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 SLC37A1P57057 533 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 FOXL2P58012 376 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 STX1BP61266 288 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 TP53BP2Q13625 1128 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 RAPSNQ13702 412 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 PDE7AQ13946 482 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 PIGGQ5H8A4 983 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 SLC6A19Q695T7 634 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 FAM180AQ6UWF9 173 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 BNC2Q6ZN30 1099 aaPredicted RBP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 RTL4Q6ZR62 310 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 CAMKMTQ7Z624 323 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 CCDC116Q8IYX3 515 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 CYP4Z2PQ8N1L4 340 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 ZNF843Q8N446 348 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 LIX1Q8N485 282 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 TRIML2Q8N7C3 387 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 BCORP1Q8N888 145 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 ZNF721Q8TF20 911 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 CKAP2Q8WWK9 683 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 EXOSC8Q96B26 276 aaKnown RBP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 CTHRC1Q96CG8 243 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 ZNF681Q96N22 645 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 SORT1Q99523 831 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 TUBB1Q9H4B7 451 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 AKTIPQ9H8T0 292 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 DDX18Q9NVP1 670 aaKnown RBP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 LRFN1Q9P244 771 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 ERVK-19Q9WJR5 959 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 COPG1Q9Y678 874 aaKnown RBP9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 LOC400499M0QZD8 3231 aa9.54□□□□□ -0.88
TRAFD1-208ENST00000552890 CROCCQ5TZA2 2017 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 ATP6AP2A0A1C7CYW4 349 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 TMEM233B4DJY2 109 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 SCAMP2O15127 329 aaKnown RBP9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 SLC25A12O75746 678 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 ATP6AP2O75787 350 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 RASAL1O95294 804 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 P04436 131 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 DRD5P21918 477 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 LCN1P31025 176 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 PPICP45877 212 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 CLK3P49761 638 aaKnown RBP9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 ID2Q02363 134 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 TUBA3CQ13748 450 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 EFR3AQ14156 821 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 ELOAQ14241 798 aaKnown RBP9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 OR1C1Q15619 314 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 PRICKLE4Q2TBC4 344 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 KRTCAP3Q53RY4 240 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 ZNF766Q5HY98 468 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 NXNQ6DKJ4 435 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 SLC25A25Q6KCM7 469 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 TUBA3EQ6PEY2 450 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 PAOXQ6QHF9 649 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 GK5Q6ZS86 529 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 PRICKLE2Q7Z3G6 844 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 EID3Q8N140 333 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 BEST3Q8N1M1 668 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 RBMXL3Q8N7X1 1067 aaKnown RBP9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 OR8J2Q8NGG1 315 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 OR5P2Q8WZ92 322 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 PPWD1Q96BP3 646 aaKnown RBP9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 TESCQ96BS2 214 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 CNRIP1Q96F85 164 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 LCORQ96JN0 433 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 AMDHD1Q96NU7 426 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 TSSK3Q96PN8 268 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 CCDC28BQ9BUN5 200 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 NUF2Q9BZD4 464 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 WWTR1Q9GZV5 400 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 TNFRSF12AQ9NP84 129 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 MAT2BQ9NZL9 334 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 BCAP29Q9UHQ4 241 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 ZNF639Q9UID6 485 aa9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 C19orf53Q9UNZ5 99 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-208ENST00000552890 A0A1W2PRB8 838 aa9.52□□□□□ -0.89
TRAFD1-208ENST00000552890 ANKRD33BA6NCL7 494 aa9.52□□□□□ -0.89
TRAFD1-208ENST00000552890 DUXAA6NLW8 204 aa9.52□□□□□ -0.89
TRAFD1-208ENST00000552890 WASHC1A8K0Z3 465 aa9.52□□□□□ -0.89
TRAFD1-208ENST00000552890 TGFBR3LH3BV60 316 aa9.52□□□□□ -0.89
TRAFD1-208ENST00000552890 ACOT7O00154 380 aa9.52□□□□□ -0.89
TRAFD1-208ENST00000552890 UBDO15205 165 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms