RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ARL8AQ96BM9 186 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 ATP6V1G3Q96LB4 118 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 ZNF681Q96N22 645 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 TSSK3Q96PN8 268 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 HES7Q9BYE0 225 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 WWTR1Q9GZV5 400 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 OR10A5Q9H207 317 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 VIPAS39Q9H9C1 493 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 MAT2BQ9NZL9 334 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 NME2P1O60361 137 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 OR6B1O95007 311 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 DDX5P17844 614 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 SDC1P18827 310 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 NME2P22392 152 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 TACR1P25103 407 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 MPIP34949 423 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 PTGER1P34995 402 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 RPL14P50914 215 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 DUSP2Q05923 314 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 MAP4K2Q12851 820 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 LTB4RQ15722 352 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 PRICKLE4Q2TBC4 344 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 RFTN2Q52LD8 501 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 CES4AQ5XG92 561 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 FAM111BQ6SJ93 734 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 FNDC5Q8NAU1 212 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 OR9A2Q8NGT5 310 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 DNAJB8Q8NHS0 232 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 ZNF675Q8TD23 568 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 GFM2Q969S9 779 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 FCRL1Q96LA6 429 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 CLMPQ9H6B4 373 aa17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 ZNF395Q9H8N7 513 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 RYDENQ9NUL5 291 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-216ENST00000552301 AKAP10O43572 662 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 LRATO95237 230 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 HPCAL1P37235 193 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 NCBP2P52298 156 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 PMP22Q01453 160 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 EXOSC7Q15024 291 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 PIGGQ5H8A4 983 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 RTL4Q6ZR62 310 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 SLC15A4Q8N697 577 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 CLHC1Q8NHS4 586 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 RAB3IL1Q8TBN0 382 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 NR4A3Q92570 626 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 PPCDCQ96CD2 204 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 EGLN2Q96KS0 407 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 SGCZQ96LD1 299 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 TAAR6Q96RI8 345 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 SORT1Q99523 831 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 C1orf50Q9BV19 199 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 ACBD3Q9H3P7 528 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 REEP4Q9H6H4 257 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 THAP1Q9NVV9 213 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 PRODH2Q9UF12 536 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 GIMAP2Q9UG22 337 aa17.1■□□□□ 0.33
PRPF40B-216ENST00000552301 ESPL1Q14674 2120 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 CAPN14A8MX76 684 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 TCP11X1B4DZS4 312 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 KLRC4-KLRK1H3BQV0 150 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 BCAS2O75934 225 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 CLPSP04118 112 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 BCKDHAP12694 445 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 PCSK2P16519 638 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 GNLYP22749 145 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 NR0B1P51843 470 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 NRG3P56975 720 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 MRPS35P82673 323 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 MAD2L1Q13257 205 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 C6orf136Q5SQH8 315 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 R3HCC1LQ7Z5L2 792 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 DND1Q8IYX4 353 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 ZNF615Q8N8J6 731 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 PSD4Q8NDX1 1056 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 OR52R1Q8NGF1 315 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 C16orf52Q8NHV5 167 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 KAT2AQ92830 837 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 ERP27Q96DN0 273 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 SPACA9Q96E40 222 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 PPP1R36Q96LQ0 422 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 C3orf30Q96M34 536 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 BARD1Q99728 777 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 C20orf27Q9GZN8 174 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 TAS2R7Q9NYW3 318 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 SH3BP4Q9P0V3 963 aa17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 EIF3LQ9Y262 564 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-216ENST00000552301 ANKUB1A6NFN9 424 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 MYO1GB0I1T2 1018 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 HMGB1P1B2RPK0 211 aaPredicted RBP17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 PDPK1O15530 556 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 SLITRK5O94991 958 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 JUNP05412 331 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 PRPS2P11908 318 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 EDN3P14138 238 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 RPL3P39023 403 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 UQCRFS1P47985 274 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 TMED10P49755 219 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 ALDH6A1Q02252 535 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms