RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 PDCD2Q16342 344 aaPredicted RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 SMU1Q2TAY7 513 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 RPUSD3Q6P087 351 aaKnown RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 VWA5B2Q8N398 1253 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 ZNF321PQ8N8H1 164 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 CATSPER1Q8NEC5 780 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 OR7G1Q8NGA0 311 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 EXOSC8Q96B26 276 aaKnown RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 TUBGCP3Q96CW5 907 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 ZNF764Q96H86 408 aaPredicted RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 C3orf30Q96M34 536 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 PCDHGB6Q9Y5F9 930 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 UQCRHLA0A096LP55 91 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 SLCO1B7G3V0H7 640 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 HRKO00198 91 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 PRKNO60260 465 aaPredicted RBP16.07■□□□□ 0.16
CDK4-208ENST00000551706 PRAMEF2O60811 474 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 CLDN1O95832 211 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 F10P00742 488 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 CD46P15529 392 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 TACR1P25103 407 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 CD96P40200 585 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 HLCSP50747 726 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 SSR4P51571 173 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 SLC37A1P57057 533 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 FUT7Q11130 342 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 OR1C1Q15619 314 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 CEBPEQ15744 281 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 INAQ16352 499 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 MPEG1Q2M385 716 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 PRICKLE4Q2TBC4 344 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 ZNF750Q32MQ0 723 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 C6orf136Q5SQH8 315 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 GPALPP1Q8IXQ4 340 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 TMEM156Q8N614 296 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 FNDC5Q8NAU1 212 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 ERP27Q96DN0 273 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 BBS4Q96RK4 519 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 BRINP2Q9C0B6 783 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 TRIM45Q9H8W5 580 aaPredicted RBP16.07■□□□□ 0.16
CDK4-208ENST00000551706 LUZP4Q9P127 313 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 LRFN1Q9P244 771 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 CFL2Q9Y281 166 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 ITPR3Q14573 2671 aa16.07■□□□□ 0.16
CDK4-208ENST00000551706 PRRC2CQ9Y520 2896 aaKnown RBP16.07■□□□□ 0.16
CDK4-208ENST00000551706 TMEM200CA6NKL6 621 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 OR2J2O76002 312 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 PRPS2P11908 318 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 BCKDHAP12694 445 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 HK2P52789 917 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 PPP2R2AP63151 447 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 R3HCC1LQ7Z5L2 792 aaKnown RBP16.06■□□□□ 0.16
CDK4-208ENST00000551706 C9orf40Q8IXQ3 194 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 CCDC116Q8IYX3 515 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 LRRC34Q8IZ02 419 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 ZNF675Q8TD23 568 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 DYDC1Q8WWB3 177 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 ASB15Q8WXK1 588 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 TMEM125Q96AQ2 219 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 EGLN2Q96KS0 407 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 C5orf34Q96MH7 638 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 TSSK3Q96PN8 268 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 REEP4Q9H6H4 257 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 MAT2BQ9NZL9 334 aa16.06■□□□□ 0.16
CDK4-208ENST00000551706 EIF3LQ9Y262 564 aaKnown RBP16.06■□□□□ 0.16
CDK4-208ENST00000551706 CPAMD8Q8IZJ3 1885 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 MYO1GB0I1T2 1018 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 WWP2O00308 870 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 TBX19O60806 448 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 BCAS2O75934 225 aaPredicted RBP16.05■□□□□ 0.16
CDK4-208ENST00000551706 SLITRK5O94991 958 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 JUNP05412 331 aaKnown RBP16.05■□□□□ 0.16
CDK4-208ENST00000551706 CT62P0C5K7 136 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 NTSP30990 170 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 SSTR4P31391 388 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 RPL3P39023 403 aaKnown RBP16.05■□□□□ 0.16
CDK4-208ENST00000551706 EMX2Q04743 252 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 INPP5JQ15735 1006 aaPredicted RBP16.05■□□□□ 0.16
CDK4-208ENST00000551706 ZNF766Q5HY98 468 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 FAM180BQ6P0A1 224 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 SLC15A4Q8N697 577 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 TMEM178AQ8NBL3 297 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 MDS2Q8NDY4 140 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 SLC22A8Q8TCC7 542 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 DOK4Q8TEW6 326 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 ZNF75CPQ92670 426 aaPredicted RBP16.05■□□□□ 0.16
CDK4-208ENST00000551706 PPCDCQ96CD2 204 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 CTHRC1Q96CG8 243 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 MTERF3Q96E29 417 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 SIGLEC12Q96PQ1 595 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 RASL10BQ96S79 203 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 NUF2Q9BZD4 464 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 OR10A5Q9H207 317 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 PNPOQ9NVS9 261 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 ANKRD10Q9NXR5 420 aa16.05■□□□□ 0.16
CDK4-208ENST00000551706 NOP53Q9NZM5 478 aaKnown RBP16.05■□□□□ 0.16
CDK4-208ENST00000551706 EXO1Q9UQ84 846 aaKnown RBP16.05■□□□□ 0.16
CDK4-208ENST00000551706 COPG1Q9Y678 874 aaKnown RBP16.05■□□□□ 0.16
CDK4-208ENST00000551706 TRPC5OSA6NMA1 111 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 A8MVJ9 347 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms