RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MIOXQ9UGB7 285 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 PFDN2Q9UHV9 154 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 SIX4Q9UIU6 781 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 HACL1Q9UJ83 578 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 FBXL3Q9UKT7 428 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 TCFL5Q9UL49 500 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 FZD10Q9ULW2 581 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 EDARQ9UNE0 448 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 MGAT4BQ9UQ53 548 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 CA5BQ9Y2D0 317 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 CARHSP1Q9Y2V2 147 aaKnown RBP5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 FIS1Q9Y3D6 152 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 PTCH2Q9Y6C5 1203 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 QSER1Q2KHR3 1735 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 ABCA3Q99758 1704 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 DSPPQ9NZW4 1301 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 KAT6AQ92794 2004 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 LCHNA4D1U4 455 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 C2orf74A8MZ97 194 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 NEDD8-MDP1E9PL57 170 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 WWP2O00308 870 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 PER2O15055 1255 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 BCAT2O15382 392 aaPredicted RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC31A2O15432 143 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 MPZL2O60487 215 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 EIF4E2O60573 245 aaKnown RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 CDRT1O95170 752 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 GADD45GO95257 159 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 CCNDBP1O95273 360 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SERPINA1P01009 418 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 IGHV2-5P01817 119 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 ICAM1P05362 532 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 KLK3P07288 261 aaPredicted RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SYPP08247 313 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 CNPP09543 421 aaKnown RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 ZGLP1P0C6A0 271 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 LINC00032P0C843 101 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 HAPLN1P10915 354 aaPredicted RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 PEPDP12955 493 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 TYRP14679 529 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 CPEP16870 476 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 ZNF37AP17032 561 aaPredicted RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 AHCYP23526 432 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SSTR2P30874 369 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SDC2P34741 201 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 PMELP40967 661 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 PTGFRP43088 359 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 BDKRB1P46663 353 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 LIMS1P48059 325 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 RFX3P48380 749 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 KCNJ3P48549 501 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 FNTBP49356 437 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 MECP2P51608 486 aaKnown RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 HMGA2P52926 109 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 ACY1Q03154 408 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 CTBP1Q13363 440 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SNTB1Q13884 538 aaKnown RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 HABP2Q14520 560 aaPredicted RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 EMC2Q15006 297 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 TRAM2Q15035 370 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 P2RY14Q15391 338 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 CHRNA6Q15825 494 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 ST3GAL2Q16842 350 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 GSG1Q2KHT4 349 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC36A2Q495M3 483 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 PAN3Q58A45 887 aaKnown RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 TMEM255AQ5JRV8 349 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 MFSD14BQ5SR56 506 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC25A30Q5SVS4 291 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SPOUT1Q5T280 376 aaKnown RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 HECTD2Q5U5R9 776 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 TRIQKQ629K1 86 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 APOBEC3HQ6NTF7 200 aaKnown RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 BHLHB9Q6PI77 547 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 AFTPHQ6ULP2 937 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 FAM198BQ6UWH4 519 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 GCNT7Q6ZNI0 430 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 QSOX2Q6ZRP7 698 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 MOB2Q70IA6 237 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 MOB3CQ70IA8 216 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 BTN2A1Q7KYR7 527 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC16A13Q7RTY0 426 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 KANSL1Q7Z3B3 1105 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 UNC93AQ86WB7 457 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 LDLRAD3Q86YD5 345 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 KRT78Q8N1N4 520 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 C10orf111Q8N326 155 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 C7orf31Q8N865 590 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 PTGR2Q8N8N7 351 aaPredicted RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 ZNF485Q8NCK3 441 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 C19orf18Q8NEA5 215 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 MDGA1Q8NFP4 955 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 OR10A6Q8NH74 314 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC35F5Q8WV83 523 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 AP3S1Q92572 193 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 CNOT9Q92600 299 aaKnown RBP5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 KCNJ9Q92806 393 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 TCEAL3Q969E4 200 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 FAM162AQ96A26 154 aa5.01□□□□□ -1.61
LSM3P2-201ENST00000551246 NTAN1Q96AB6 310 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms