RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 FOXD3Q9UJU5 478 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-205ENST00000550013 TSC22D4Q9Y3Q8 395 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 PCDHGA11Q9Y5H2 935 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 CAPN14A8MX76 684 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 EEF1E1-BLOC1S5C9J1V9 151 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 GNB5O14775 395 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 EIF3HO15372 352 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB5C-205ENST00000550013 EEF1E1O43324 174 aaKnown RBP14.08□□□□□ -0.16
RAB5C-205ENST00000550013 SNX4O95219 450 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 EPXP11678 715 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 DRD2P14416 443 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 FOSL1P15407 271 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 BMP7P18075 431 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 PAFAH1B1P43034 410 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 PIK3CGP48736 1102 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 NEK2P51955 445 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 ARFIP1P53367 373 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 GNG11P61952 73 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 IRF9Q00978 393 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 CALCOCO2Q13137 446 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 SETDB1Q15047 1291 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 TOMM20Q15388 145 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 CPSF6Q16630 551 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB5C-205ENST00000550013 DEFB113Q30KQ7 82 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 WIPI1Q5MNZ9 446 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-205ENST00000550013 LIPJQ5W064 366 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 HLA-DQA1Q5Y7H0 255 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 OR52E8Q6IFG1 317 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 PACS2Q86VP3 889 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 CENPLQ8N0S6 344 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-205ENST00000550013 ZNF615Q8N8J6 731 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 ADIPOR1Q96A54 375 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 TP53INP1Q96A56 240 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 WDYHV1Q96HA8 205 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 NAPGQ99747 312 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-205ENST00000550013 PLEKHF2Q9H8W4 249 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 WDR41Q9HAD4 459 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 RYDENQ9NUL5 291 aaKnown RBP14.08□□□□□ -0.16
RAB5C-205ENST00000550013 GRHL1Q9NZI5 618 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 WHRNQ9P202 907 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 RNF11Q9Y3C5 154 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 IKBKGQ9Y6K9 419 aa14.08□□□□□ -0.16
RAB5C-205ENST00000550013 MBD3L4A6NDZ8 208 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-205ENST00000550013 MBD3L3A6NE82 208 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-205ENST00000550013 MBD3L5A6NJ08 208 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-205ENST00000550013 CD8B2A6NJW9 211 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 H0YIV9 168 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 CTSSP25774 331 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 CRABP2P29373 138 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 SOX18P35713 384 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 CASP3P42574 277 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 PHEXP78562 749 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 FUT7Q11130 342 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 CUL3Q13618 768 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 KEAP1Q14145 624 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 PFKFB4Q16877 469 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 NHSL2Q5HYW2 709 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 DESI1Q6ICB0 168 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 GOLGA7Q7Z5G4 137 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 YRDCQ86U90 279 aaKnown RBP14.07□□□□□ -0.16
RAB5C-205ENST00000550013 KIF18BQ86Y91 864 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 MED12LQ86YW9 2145 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 GALNT12Q8IXK2 581 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 C9orf106Q8NAJ2 232 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 MBD3L2Q8NHZ7 208 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-205ENST00000550013 ABTB1Q969K4 478 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-205ENST00000550013 NTNG2Q96CW9 530 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 SECISBP2Q96T21 854 aaKnown RBP14.07□□□□□ -0.16
RAB5C-205ENST00000550013 SMR3AQ99954 134 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 ERP44Q9BS26 406 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 OR10A5Q9H207 317 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 DTX4Q9Y2E6 619 aa14.07□□□□□ -0.16
RAB5C-205ENST00000550013 SYCE1LA8MT33 242 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 GSTA2P09210 222 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 GFAPP14136 432 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 PIK3R1P27986 724 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 ABCD3P28288 659 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 PTPN6P29350 595 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 SLCO1A2P46721 670 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 TMED10P49755 219 aaKnown RBP14.06□□□□□ -0.16
RAB5C-205ENST00000550013 NAGLUP54802 743 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 NRG3P56975 720 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 GTF2H2Q13888 395 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 POU4F3Q15319 338 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 SF3B4Q15427 424 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAB5C-205ENST00000550013 NNATQ16517 81 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 TIGD3Q6B0B8 471 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 GTF2H2CQ6P1K8 395 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 ANGPTL8Q6UXH0 198 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 Q71RC1 249 aaPredicted RBP14.06□□□□□ -0.16
RAB5C-205ENST00000550013 NUDT13Q86X67 352 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 FAM83FQ8NEG4 500 aaPredicted RBP14.06□□□□□ -0.16
RAB5C-205ENST00000550013 WDR20Q8TBZ3 569 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 FBF1Q8TES7 1133 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 REPS1Q96D71 796 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 TMEM41AQ96HV5 264 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 NXF5Q9H1B4 397 aaKnown RBP14.06□□□□□ -0.16
RAB5C-205ENST00000550013 IPPKQ9H8X2 491 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 CALHM2Q9HA72 323 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 JKAMPQ9P055 326 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms