RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	MRPS35	P82673	323 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	PRR5	P85299	388 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	MAP4K2	Q12851	820 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	SELPLG	Q14242	412 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	RTP5	Q14D33	572 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	ELAVL1	Q15717	326 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	FHL5	Q5TD97	284 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	C6orf163	Q5TEZ5	329 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	SAXO2	Q658L1	398 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	FAM111B	Q6SJ93	734 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	TMEM151B	Q8IW70	566 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	GALNT12	Q8IXK2	581 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	ARHGAP24	Q8N264	748 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	OR2L13	Q8N349	312 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	VWA5B2	Q8N398	1253 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	ENDOV	Q8N8Q3	282 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	OR7G2	Q8NG99	324 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	OR56A1	Q8NGH5	318 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	OR2Y1	Q8NGV0	311 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	RIT1	Q92963	219 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	MCUR1	Q96AQ8	359 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	CTHRC1	Q96CG8	243 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	FAM122A	Q96E09	287 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	NEURL3	Q96EH8	262 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	THTPA	Q9BU02	230 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	THUMPD3	Q9BV44	507 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	TRIM8	Q9BZR9	551 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	FAM117A	Q9C073	453 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	ADAP2	Q9NPF8	381 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	PNO1	Q9NRX1	252 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	DDX18	Q9NVP1	670 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	ADA2	Q9NZK5	511 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	ACSL6	Q9UKU0	697 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	CORO2B	Q9UQ03	480 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	PADI2	Q9Y2J8	665 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	AP3M1	Q9Y2T2	418 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	PTRH2	Q9Y3E5	179 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	L3MBTL1	Q9Y468	752 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	ASPM	Q8IZT6	3477 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	EXPH5	Q8NEV8	1989 aa		11.43	□□□□□ -0.58
ERBB3-208	ENST00000549205	PRRC2C	Q9Y520	2896 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	URB1	O60287	2271 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	UPK1A	O00322	258 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	UMOD	P07911	640 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	CT62	P0C5K7	136 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	TCN2	P20062	427 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	PLA2G5	P39877	138 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	FOLR3	P41439	243 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	EEFSEC	P57772	596 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	VAC14	Q08AM6	782 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	FOXC1	Q12948	553 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	TP53BP2	Q13625	1128 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	SPATS1	Q496A3	300 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	PIGG	Q5H8A4	983 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	SAMD4B	Q5PRF9	694 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	FAAH2	Q6GMR7	532 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	BHLHB9	Q6PI77	547 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	TMEM205	Q6UW68	189 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	LANCL3	Q6ZV70	420 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	ANKRD37	Q7Z713	158 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	OR14A16	Q8NHC5	309 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	PNPT1	Q8TCS8	783 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	METTL21A	Q8WXB1	218 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	MAGED4	Q96JG8	741 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	ZNF578	Q96N58	590 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	RAD21L1	Q9H4I0	556 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	KAT8	Q9H7Z6	458 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	ZNF639	Q9UID6	485 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205	CELSR3	Q9NYQ7	3312 aa		11.42	□□□□□ -0.58
ERBB3-208	ENST00000549205		A8MUA0	341 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	C17orf105	B2RV13	164 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	C21orf140	B9A014	251 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	TERT	O14746	1132 aa	Known RBP	11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	PCDH17	O14917	1159 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	DYRK3	O43781	588 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	BRINP1	O60477	761 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	PSMG1	O95456	288 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	CBX7	O95931	251 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	GPX2	P18283	190 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	TNNI3	P19429	210 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	S1PR1	P21453	382 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	MAGEA8	P43361	318 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	MVD	P53602	400 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	OR4D2	P58180	307 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	RPS15	P62841	145 aa	Known RBP	11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	KCNJ2	P63252	427 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	LIPE	Q05469	1076 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	DNASE1L3	Q13609	305 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	CEACAM7	Q14002	265 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	ZNF267	Q14586	743 aa	Predicted RBP	11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	EXOSC7	Q15024	291 aa	Known RBP	11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	RGN	Q15493	299 aa		11.41	□□□□□ -0.58
ERBB3-208	ENST00000549205	TRMT12	Q53H54	448 aa	Known RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms