RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 SYT14P1Q58G82 188 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 LRRC56Q8IYG6 542 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 DTX3Q8N9I9 347 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 SLC35G5Q96KT7 338 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 NECTIN4Q96NY8 510 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 SMAD5Q99717 465 aaKnown RBP11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 TMEM246Q9BRR3 403 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 PLA2G12AQ9BZM1 189 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 TBC1D17Q9HA65 648 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 C3orf14Q9HBI5 128 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 CNIH4Q9P003 139 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 HYKKA2RU49 373 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 A8MVJ9 347 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 CAPN5O15484 640 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 TPD52L2O43399 206 aaKnown RBP11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 LILRB5O75023 590 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 NCR1O76036 304 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 PDE9AO76083 593 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 CD79BP40259 229 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 ETV6P41212 452 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 SSR2P43308 183 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 GPR19Q15760 415 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 SFTPA1Q8IWL2 248 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 PROKR2Q8NFJ6 384 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 ARRDC3Q96B67 414 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 SRRQ9GZT4 340 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 C11orf54Q9H0W9 315 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 ZBP1Q9H171 429 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 RMI1Q9H9A7 625 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 SCN3AQ9NY46 2000 aa11.28□□□□□ -0.6
RAPGEF3-219ENST00000549151 PRR23AA6NEV1 266 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 PCCBP05166 539 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 NR2F6P10588 404 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 PIPP12273 146 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 ZNF24P17028 368 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 PPP2R1BP30154 601 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 GIPRP48546 466 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 NCBP2P52298 156 aaKnown RBP eCLIP11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 ERVFC1P60507 584 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 INSL4Q14641 139 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 ARHGAP15Q53QZ3 475 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 PAMR1Q6UXH9 720 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 SLAIN1Q8ND83 568 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 ATP6V1C2Q8NEY4 427 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 APOBEC4Q8WW27 367 aaKnown RBP11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 NXPE3Q969Y0 559 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 ARMC5Q96C12 935 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 ZBED6CLQ96FA7 236 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 ART5Q96L15 291 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 CAPNS2Q96L46 248 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 BBS4Q96RK4 519 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 TMED9Q9BVK6 235 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 SIRT3Q9NTG7 399 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 NDUFB11Q9NX14 153 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 A4GNTQ9UNA3 340 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 DOCK9Q9BZ29 2069 aa11.27□□□□□ -0.6
RAPGEF3-219ENST00000549151 NOTCH4Q99466 2003 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 SLC35F4A4IF30 521 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 CASKO14936 926 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 RAB36O95755 333 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 APEX1P27695 318 aaKnown RBP11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 BSGP35613 385 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 SOX18P35713 384 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 ATP6V1E1P36543 226 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 MAPK9P45984 424 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 MEDAGQ5VYS4 303 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 C12orf73Q69YU5 71 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 B3GLCTQ6Y288 498 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 IKBIPQ70UQ0 350 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 GRASPQ7Z6J2 395 aaPredicted RBP11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 ENKURQ8TC29 256 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 RNFT2Q96EX2 444 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 WDR34Q96EX3 536 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 ST6GAL2Q96JF0 529 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 HDHD5Q9BXW7 423 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 NEUROD4Q9HD90 331 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 P2RX2Q9UBL9 471 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 MOSPD1Q9UJG1 213 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 MN1Q10571 1320 aaPredicted RBP11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 A0A1W2PS29 197 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 LCMT2O60294 686 aaKnown RBP11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 LILRB3O75022 631 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 GUCY1B2O75343 617 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 EIF2S1P05198 315 aaKnown RBP11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 RAB25P57735 213 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 FLYWCH1Q4VC44 716 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 KIAA1161Q6NSJ0 714 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 RRM2BQ7LG56 351 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 PDZD3Q86UT5 571 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 AMZ2Q86W34 360 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 NUDT13Q86X67 352 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 FAM129CQ86XR2 697 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 CCDC116Q8IYX3 515 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 OR52P1PQ8NH57 321 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 TM9SF4Q92544 642 aa11.27□□□□□ -0.61
RAPGEF3-219ENST00000549151 KCTD7Q96MP8 289 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms