RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 NEIL2Q969S2 332 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 TRMT61AQ96FX7 289 aaKnown RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 ZNF354BQ96LW1 612 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 SLC6A18Q96N87 628 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 COL25A1Q9BXS0 654 aaPredicted RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 AHSPQ9NZD4 102 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 CLEC1BQ9P126 229 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 RHCGQ9UBD6 479 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 PLEKHB1Q9UF11 243 aaPredicted RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 CD84Q9UIB8 345 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 ACAD8Q9UKU7 415 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 PCDHGB7Q9Y5F8 929 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 HELZP42694 1942 aaKnown RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 DENND4CQ5VZ89 1909 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 LINC00854A0A1B0GVQ3 168 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 DLL1O00548 723 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 TSPAN6O43657 245 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 SH3BP5O60239 455 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 NME6O75414 186 aaPredicted RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 SOX14O95416 240 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 BCHEP06276 602 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 GAAP10253 952 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 GSTM3P21266 225 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 HLA-FP30511 346 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 GABRA5P31644 462 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 CD83Q01151 205 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 RAB40BQ12829 278 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 FAPQ12884 760 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 TPBGQ13641 420 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 MPEG1Q2M385 716 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 CYP27C1Q4G0S4 372 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 ZNF628Q5EBL2 1059 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 C22orf42Q6IC83 251 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 ADNP2Q6IQ32 1131 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 ARMCX6Q7L4S7 300 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 GTPBP2Q9BX10 602 aaKnown RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 FGF20Q9NP95 211 aaPredicted RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 GIMAP4Q9NUV9 329 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 MRPS18AQ9NVS2 196 aaKnown RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 RBFOX1Q9NWB1 397 aaKnown RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 STMN3Q9NZ72 180 aa12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 MBD1Q9UIS9 605 aaPredicted RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 SPIN1Q9Y657 262 aaPredicted RBP12.73□□□□□ -0.37
SMPDL3B-206ENST00000549094 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 C2orf16Q68DN1 1984 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 A0A1W2PRU2 124 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 OR6C70A6NIJ9 312 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 OR2AG2A6NM03 316 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 WASH3PC4AMC7 463 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 FFAR1O14842 300 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 ORC5O43913 435 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 BNIP3LO60238 219 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 MMP20O60882 483 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 MTX2O75431 263 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 IL3P08700 152 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 SLC2A2P11168 524 aaPredicted RBP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 FGF9P31371 208 aaPredicted RBP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 GPC1P35052 558 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 LTBRP36941 435 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 RECQLP46063 649 aaPredicted RBP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 STK19P49842 368 aaPredicted RBP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 GZMKP49863 264 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 SMSP52788 366 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 NTHL1P78549 312 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 TFF2Q03403 129 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 MXD1Q05195 221 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 DLX2Q07687 328 aaPredicted RBP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 RIN1Q13671 783 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 DOC2BQ14184 412 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 PUM1Q14671 1186 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 SEC23BQ15437 767 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 LEXMQ3ZCV2 418 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 ARHGAP15Q53QZ3 475 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 HENMT1Q5T8I9 393 aaKnown RBP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 SLC36A4Q6YBV0 504 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 ZNF730Q6ZMV8 503 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 DEF8Q6ZN54 512 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 PLA2G15Q8NCC3 412 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 DUSP18Q8NEJ0 188 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 WDR48Q8TAF3 677 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 TMEM163Q8TC26 289 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 SLC5A11Q8WWX8 675 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 NR4A3Q92570 626 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 TMEM19Q96HH6 336 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 SGPP1Q9BX95 441 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 IRF2BPLQ9H1B7 796 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 SATB2Q9UPW6 733 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 MRPS23Q9Y3D9 190 aaKnown RBP12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 PCM1Q15154 2024 aa12.72□□□□□ -0.37
SMPDL3B-206ENST00000549094 HEPACAM2A8MVW5 462 aa12.71□□□□□ -0.37
SMPDL3B-206ENST00000549094 FAM227AF5H4B4 570 aa12.71□□□□□ -0.37
SMPDL3B-206ENST00000549094 NPC1O15118 1278 aa12.71□□□□□ -0.37
SMPDL3B-206ENST00000549094 PDPK1O15530 556 aa12.71□□□□□ -0.37
SMPDL3B-206ENST00000549094 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms