RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 HSD11B1LQ7Z5J1 315 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 TMEM43Q9BTV4 400 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 LINC00597Q9H2U6 94 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 SLAMF7Q9NQ25 335 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 MIEF1Q9NQG6 463 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 MAT2BQ9NZL9 334 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 PIPSLA2A3N6 862 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 ISM1B1AKI9 464 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 PLOD3O60568 738 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 TSC22D2O75157 780 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 OR12D1P0DN82 309 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 UQCRC2P22695 453 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 AVPR1BP47901 424 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 MAPK12P53778 367 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 MAB21L1Q13394 359 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 TPBGQ13641 420 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 C3orf38Q5JPI3 329 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 TYW3Q6IPR3 259 aaKnown RBP12.99□□□□□ -0.33
HDAC7-228ENST00000548938 Q6ZVL8 140 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 COMTD1Q86VU5 262 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 AMIGO1Q86WK6 493 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 MEX3DQ86XN8 651 aaKnown RBP12.99□□□□□ -0.33
HDAC7-228ENST00000548938 KLHDC8AQ8IYD2 350 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 TMEM163Q8TC26 289 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF480Q8WV37 535 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 UFD1Q92890 307 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 GPA33Q99795 319 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 MARVELD1Q9BSK0 173 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 FUZQ9BT04 418 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 VN1R3Q9BXE9 311 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 ANKDD1BA6NHY2 528 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 LEUTXA8MZ59 168 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 EFEMP2O95967 443 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 POU3F3P20264 500 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-228ENST00000548938 MMP11P24347 488 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 RPL3P39023 403 aaKnown RBP12.99□□□□□ -0.33
HDAC7-228ENST00000548938 ZDHHC20Q5W0Z9 365 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 PODNL1Q6PEZ8 512 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 UNC5DQ6UXZ4 953 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 SLC30A8Q8IWU4 369 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 CHST14Q8NCH0 376 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF740Q8NDX6 193 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 SENP5Q96HI0 755 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-228ENST00000548938 TEFMQ96QE5 360 aaKnown RBP12.99□□□□□ -0.33
HDAC7-228ENST00000548938 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 MOSPD1Q9UJG1 213 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 GPR52Q9Y2T5 361 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 PCDHGB7Q9Y5F8 929 aa12.99□□□□□ -0.33
HDAC7-228ENST00000548938 KIAA0100Q14667 2235 aaKnown RBP12.98□□□□□ -0.33
HDAC7-228ENST00000548938 SHISA3A0PJX4 238 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 M0R3H8 397 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF197O14709 1029 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 ORC5O43913 435 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 WEE1P30291 646 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 GABRA5P31644 462 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 ETV3P41162 512 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 AGFG1P52594 562 aaKnown RBP12.98□□□□□ -0.33
HDAC7-228ENST00000548938 INSL4Q14641 139 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 C1orf53Q5VUE5 145 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 TMCO2Q7Z6W1 182 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-228ENST00000548938 FGF11Q92914 225 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 MTERF3Q96E29 417 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 RNFT2Q96EX2 444 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 TMEM169Q96HH4 297 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 COQ7Q99807 217 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 ATF6BQ99941 703 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 FBXW2Q9UKT8 454 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 GSTK1Q9Y2Q3 226 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 ANHXE9PGG2 379 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 FOXE1O00358 373 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-228ENST00000548938 SLC43A1O75387 559 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 LALBAP00709 142 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 EPHX1P07099 455 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 NPPBP16860 134 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 GIPRP48546 466 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 CTBP2P56545 445 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 UBE3AQ05086 875 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 CCDC85BQ15834 202 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-228ENST00000548938 SNAPC1Q16533 368 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 ESCO2Q56NI9 601 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 ZER1Q7Z7L7 766 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 C9orf62Q8N4C0 152 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 RASGEF1AQ8N9B8 481 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 SLC37A3Q8NCC5 494 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 WACQ9BTA9 647 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 PLA2G12AQ9BZM1 189 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 A4GALTQ9NPC4 353 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 A4GNTQ9UNA3 340 aa12.98□□□□□ -0.33
HDAC7-228ENST00000548938 TMEM129A0AVI4 362 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 INMT-MINDY4F8WBC2 141 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 RFXAPO00287 272 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 SH3BP5O60239 455 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 NUDT1P36639 197 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 KCNJ5P48544 419 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 INPP1P49441 399 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 EVX1P49640 407 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 MRPL28Q13084 256 aaKnown RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 LRRC32Q14392 662 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 TOR2AQ5JU69 321 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 CNKSR3Q6P9H4 555 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms