RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 WFDC6Q9BQY6 131 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 SLC46A2Q9BY10 475 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZCCHC2Q9C0B9 1178 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 RHBGQ9H310 441 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PPP1R3EQ9H7J1 279 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 RPRD1BQ9NQG5 326 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 P2RX2Q9UBL9 471 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 IL36AQ9UHA7 158 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 EXOSC1Q9Y3B2 195 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TRDV1A0A1B0GX56 115 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 TEX28O15482 410 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 SLC28A2O43868 658 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 B4GALT2O60909 372 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 CSF2P04141 144 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 EPHX1P07099 455 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 CTSLP07711 333 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 ALAS2P22557 587 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 UBE3AQ05086 875 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 RIN1Q13671 783 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 MLC1Q15049 377 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 SNAPC1Q16533 368 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 SPDYE7PQ495Y7 208 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 CRTC2Q53ET0 693 aaPredicted RBP9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 KHDRBS2Q5VWX1 349 aaKnown RBP9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 SYCE2Q6PIF2 218 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 SLC36A4Q6YBV0 504 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 MRGPREQ86SM8 312 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 LMNTD1Q8N9Z9 388 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 MORN4Q8NDC4 146 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 C19orf18Q8NEA5 215 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 OR4K5Q8NGD3 323 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 OR52P1PQ8NH57 321 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 UBASH3BQ8TF42 649 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 ZBED6CLQ96FA7 236 aaPredicted RBP9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 SCLYQ96I15 445 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 LINC00615Q96LM1 132 aaPredicted RBP9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 QRFPRQ96P65 431 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 COQ7Q99807 217 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 ARHGAP9Q9BRR9 750 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 FNDC11Q9BVV2 318 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 SMG9Q9H0W8 520 aaKnown RBP9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 DPEP2Q9H4A9 486 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 NIPAL2Q9H841 368 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 RBFOX1Q9NWB1 397 aaKnown RBP9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 FBXW2Q9UKT8 454 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 NDRG2Q9UN36 371 aaKnown RBP9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 CCDC88CQ9P219 2028 aa9.34□□□□□ -0.91
SMARCD1-205ENST00000548573 C17orf113A0A1B0GUU1 675 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 OR6C70A6NIJ9 312 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 TBX6O95947 436 aaPredicted RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 ALDH1A1P00352 501 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 C1QBP02746 253 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 LRG1P02750 347 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 PRKAR1AP10644 381 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 SLC2A2P11168 524 aaPredicted RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 CHRNB1P11230 501 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 GJA1P17302 382 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 ACADLP28330 430 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 BSGP35613 385 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 NNMTP40261 264 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 IL12RB1P42701 662 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 CCT3P49368 545 aaKnown RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 GZMKP49863 264 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 HOXC5Q00444 222 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 FABP5Q01469 135 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 C19orf57Q0VDD7 668 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 HSPB3Q12988 150 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 TNK1Q13470 666 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 EFR3AQ14156 821 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 TATDN3Q17R31 274 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 MINDY4Q4G0A6 757 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 OR2G6Q5TZ20 316 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 TRIQKQ629K1 86 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 TMEM215Q68D42 235 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 KIAA0907Q7Z7F0 614 aaPredicted RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 TRAPPC5Q8IUR0 188 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 TRIM48Q8IWZ4 208 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 GATAD2BQ8WXI9 593 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 IRF7Q92985 503 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 RNFT2Q96EX2 444 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 DTD2Q96FN9 168 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 MRGPRX3Q96LB0 322 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 PRRC1Q96M27 445 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 SPATA5L1Q9BVQ7 753 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 MS4A8Q9BY19 250 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 MAN2C1Q9NTJ4 1040 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 ACSS1Q9NUB1 689 aaPredicted RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 SRRDQ9UH36 339 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 SLC9A8Q9Y2E8 581 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 CARD8Q9Y2G2 431 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 YARS2Q9Y2Z4 477 aaKnown RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 BRCA2P51587 3418 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 NUP210Q8TEM1 1887 aaPredicted RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 MTCL1Q9Y4B5 1905 aaKnown RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 SCN5AQ14524 2016 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 PRAMEF27A3QJZ7 478 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 M0R3H8 397 aa9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 NRG2O14511 850 aaPredicted RBP9.33□□□□□ -0.92
SMARCD1-205ENST00000548573 ARHGEF9O43307 516 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms