RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 AGAP11Q8TF27 550 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 ZNF501Q96CX3 271 aaPredicted RBP3.92□□□□□ -1.78
CBX5-203ENST00000547872 ADGRG7Q96K78 797 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 NSMCE3Q96MG7 304 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 BARD1Q99728 777 aaKnown RBP3.92□□□□□ -1.78
CBX5-203ENST00000547872 TSG101Q99816 390 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 CRACR2AQ9BSW2 395 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 TUBB2BQ9BVA1 445 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 MAGEF1Q9HAY2 307 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 ZNF160Q9HCG1 818 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 KLHL1Q9NR64 748 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 GPATCH2LQ9NWQ4 482 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 COQ3Q9NZJ6 369 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 ZNF624Q9P2J8 865 aaPredicted RBP3.92□□□□□ -1.78
CBX5-203ENST00000547872 DHCR7Q9UBM7 475 aaKnown RBP3.92□□□□□ -1.78
CBX5-203ENST00000547872 NOCTQ9UK39 431 aaKnown RBP3.92□□□□□ -1.78
CBX5-203ENST00000547872 RCOR1Q9UKL0 485 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 PROCRQ9UNN8 238 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 TRAF3IP3Q9Y228 551 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 DOCK4Q8N1I0 1966 aa3.92□□□□□ -1.78
CBX5-203ENST00000547872 A0A1B0GVL5 298 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 OR6C74A6NCV1 312 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 SLC9B1P1A6NJY1 282 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 E7EQ34 232 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 NPIPA5E9PKD4 350 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 CDC40O60508 579 aaKnown RBP eCLIP3.91□□□□□ -1.78
CBX5-203ENST00000547872 GAGE7O76087 117 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 CAPN1P07384 714 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 HOXB5P09067 269 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 GAGE12FP0CL80 117 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 GAGE12GP0CL81 117 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 GAGE12IP0CL82 117 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 IGHV4-30-4P0DP06 118 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 IL4RP24394 825 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 HNRNPH1P31943 449 aaKnown RBP3.91□□□□□ -1.78
CBX5-203ENST00000547872 RORAP35398 523 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 SUOXP51687 545 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 POLR2LP62875 67 aaKnown RBP3.91□□□□□ -1.78
CBX5-203ENST00000547872 GAGE1Q13065 139 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 GAGE4Q13068 117 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 AIMP2Q13155 320 aaKnown RBP3.91□□□□□ -1.78
CBX5-203ENST00000547872 SNTA1Q13424 505 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 XRCC4Q13426 336 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 RBBP7Q16576 425 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 SLC25A52Q3SY17 297 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 TFDP3Q5H9I0 405 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 FAM182AQ5T1J6 154 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 CES4AQ5XG92 561 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 KLHL10Q6JEL2 608 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 IGFL3Q6UXB1 125 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 B3GNT6Q6ZMB0 384 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 SLC26A9Q7LBE3 791 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 GSTA5Q7RTV2 222 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 C16orf82Q7Z2V1 217 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 OOSP2Q86WS3 158 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 TRAPPC5Q8IUR0 188 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 PGBD5Q8N414 524 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 WDTC1Q8N5D0 677 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 RTL3Q8N8U3 475 aaKnown RBP3.91□□□□□ -1.78
CBX5-203ENST00000547872 AVL9Q8NBF6 648 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 LINC00301Q8NCQ3 95 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 GOT1L1Q8NHS2 421 aaPredicted RBP3.91□□□□□ -1.78
CBX5-203ENST00000547872 HUS1BQ8NHY5 278 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 GDAP1Q8TB36 358 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 NAT14Q8WUY8 206 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 SLC35C1Q96A29 364 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 C8orf44Q96CB5 159 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 ARSGQ96EG1 525 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 ZNF641Q96N77 438 aaPredicted RBP3.91□□□□□ -1.78
CBX5-203ENST00000547872 NRTNQ99748 197 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 HES7Q9BYE0 225 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 CXXC4Q9H2H0 198 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 TXLNGQ9NUQ3 528 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 HRASLS2Q9NWW9 162 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 TAS2R10Q9NYW0 307 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 ATXN10Q9UBB4 475 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 MALT1Q9UDY8 824 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 SLC23A2Q9UGH3 650 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 ARMCX3Q9UH62 379 aaPredicted RBP3.91□□□□□ -1.78
CBX5-203ENST00000547872 NPIPA1Q9UND3 350 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 NEU3Q9UQ49 428 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 ERVK-11Q9UQG0 969 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 WDR37Q9Y2I8 494 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 AAR2Q9Y312 384 aaKnown RBP3.91□□□□□ -1.78
CBX5-203ENST00000547872 MEMO1Q9Y316 297 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 MFHAS1Q9Y4C4 1052 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 FER1L5A0AVI2 2057 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 PIKFYVEQ9Y2I7 2098 aa3.91□□□□□ -1.78
CBX5-203ENST00000547872 FAM237BA0A1B0GVD1 139 aa3.9□□□□□ -1.79
CBX5-203ENST00000547872 OR5K3A6NET4 321 aa3.9□□□□□ -1.79
CBX5-203ENST00000547872 TRIM64A6NGJ6 449 aa3.9□□□□□ -1.79
CBX5-203ENST00000547872 TRIM64BA6NI03 449 aa3.9□□□□□ -1.79
CBX5-203ENST00000547872 OR5K4A6NMS3 321 aa3.9□□□□□ -1.79
CBX5-203ENST00000547872 EIF3CLB5ME19 914 aaKnown RBP3.9□□□□□ -1.79
CBX5-203ENST00000547872 TOX3O15405 576 aaPredicted RBP3.9□□□□□ -1.79
CBX5-203ENST00000547872 KLHL41O60662 606 aa3.9□□□□□ -1.79
CBX5-203ENST00000547872 KLF7O75840 302 aaPredicted RBP3.9□□□□□ -1.79
CBX5-203ENST00000547872 SLC25A14O95258 325 aaPredicted RBP3.9□□□□□ -1.79
CBX5-203ENST00000547872 JCHAINP01591 159 aa3.9□□□□□ -1.79
CBX5-203ENST00000547872 TPOP07202 933 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms