RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 COQ8BQ96D53 544 aa13.43□□□□□ -0.26
DDX54-203ENST00000546869 BBS4Q96RK4 519 aa13.43□□□□□ -0.26
DDX54-203ENST00000546869 PRPF18Q99633 342 aaKnown RBP13.43□□□□□ -0.26
DDX54-203ENST00000546869 UTP23Q9BRU9 249 aaKnown RBP13.43□□□□□ -0.26
DDX54-203ENST00000546869 C1orf50Q9BV19 199 aa13.43□□□□□ -0.26
DDX54-203ENST00000546869 OR10A5Q9H207 317 aa13.43□□□□□ -0.26
DDX54-203ENST00000546869 SLCO1B3Q9NPD5 702 aa13.43□□□□□ -0.26
DDX54-203ENST00000546869 MARCOQ9UEW3 520 aaPredicted RBP13.43□□□□□ -0.26
DDX54-203ENST00000546869 SCAMP2O15127 329 aaKnown RBP13.42□□□□□ -0.26
DDX54-203ENST00000546869 ITGA10O75578 1167 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 PRB1P04280 392 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 EPHA3P29320 983 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 NTSP30990 170 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 HPCAL1P37235 193 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 CD96P40200 585 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 CYB561P49447 251 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 DIO3P55073 304 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 ZNF169Q14929 603 aaPredicted RBP13.42□□□□□ -0.26
DDX54-203ENST00000546869 EBPQ15125 230 aaKnown RBP13.42□□□□□ -0.26
DDX54-203ENST00000546869 NADK2Q4G0N4 442 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 TRMT12Q53H54 448 aaKnown RBP13.42□□□□□ -0.26
DDX54-203ENST00000546869 FCRLBQ6BAA4 426 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 FAM180BQ6P0A1 224 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 FAM111BQ6SJ93 734 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 SLC29A4Q7RTT9 530 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 MAVSQ7Z434 540 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 PTRH1Q86Y79 214 aaKnown RBP13.42□□□□□ -0.26
DDX54-203ENST00000546869 ZNF441Q8N8Z8 693 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 GFM2Q969S9 779 aaKnown RBP13.42□□□□□ -0.26
DDX54-203ENST00000546869 PPP1R36Q96LQ0 422 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 AMDHD1Q96NU7 426 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 BRINP2Q9C0B6 783 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 GLIPR2Q9H4G4 154 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 ATAD3AQ9NVI7 634 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 PLA2G3Q9NZ20 509 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 USH1CQ9Y6N9 552 aa13.42□□□□□ -0.26
DDX54-203ENST00000546869 COL6A6A6NMZ7 2263 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 C2orf92A0A1B0GVN3 265 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 ANKRD28O15084 1053 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 PDPK1O15530 556 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 AKAP10O43572 662 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 PRAMEF2O60811 474 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 OR2J2O76002 312 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 LRATO95237 230 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 CBX7O95931 251 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 SSTR4P31391 388 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 SSR4P51571 173 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 NCBP2P52298 156 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDX54-203ENST00000546869 DCAF7P61962 342 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 PSPHP78330 225 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 CPTPQ5TA50 214 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 FHL5Q5TD97 284 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 DND1Q8IYX4 353 aaKnown RBP13.41□□□□□ -0.26
DDX54-203ENST00000546869 Q8NA96 180 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 MDS2Q8NDY4 140 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 ADCY4Q8NFM4 1077 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 OR9A2Q8NGT5 310 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 CLHC1Q8NHS4 586 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 ZFP28Q8NHY6 868 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 ADIPOR1Q96A54 375 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 TESCQ96BS2 214 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 ZBED6CLQ96FA7 236 aaPredicted RBP13.41□□□□□ -0.26
DDX54-203ENST00000546869 RASL10BQ96S79 203 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 SIKE1Q9BRV8 207 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 BHLHE41Q9C0J9 482 aaPredicted RBP13.41□□□□□ -0.26
DDX54-203ENST00000546869 WWTR1Q9GZV5 400 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 CCDC134Q9H6E4 229 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 WDR55Q9H6Y2 383 aaPredicted RBP13.41□□□□□ -0.26
DDX54-203ENST00000546869 SLAMF7Q9NQ25 335 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 SH3BP4Q9P0V3 963 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 NTMQ9P121 344 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 PRODH2Q9UF12 536 aa13.41□□□□□ -0.26
DDX54-203ENST00000546869 C19orf53Q9UNZ5 99 aaPredicted RBP13.41□□□□□ -0.26
DDX54-203ENST00000546869 HEMK1Q9Y5R4 338 aaPredicted RBP13.41□□□□□ -0.26
DDX54-203ENST00000546869 EDF1O60869 148 aaKnown RBP13.4□□□□□ -0.26
DDX54-203ENST00000546869 NEURL1O76050 574 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 EMDP50402 254 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 IRX1P78414 480 aaPredicted RBP13.4□□□□□ -0.26
DDX54-203ENST00000546869 SRSF11Q05519 484 aaKnown RBP13.4□□□□□ -0.26
DDX54-203ENST00000546869 DUSP8Q13202 625 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 OR1C1Q15619 314 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 LTB4RQ15722 352 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 INAQ16352 499 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 DPY19L1Q2PZI1 675 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 SLC9B1Q4ZJI4 515 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 ZNF385BQ569K4 471 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 ZNF468Q5VIY5 522 aaPredicted RBP13.4□□□□□ -0.26
DDX54-203ENST00000546869 OPN5Q6U736 354 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 OR2L13Q8N349 312 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 TMEM156Q8N614 296 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 OR8J2Q8NGG1 315 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 C16orf52Q8NHV5 167 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 PSMA8Q8TAA3 256 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 SLC22A8Q8TCC7 542 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 THAP3Q8WTV1 239 aaPredicted RBP13.4□□□□□ -0.26
DDX54-203ENST00000546869 ELP4Q96EB1 424 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 SCMH1Q96GD3 660 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 MFRPQ9BY79 579 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms