RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 ARID1AO14497 2285 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 C1orf226A1L170 272 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 EMC8O43402 210 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 ACVR2AP27037 513 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 PPP2R2BQ00005 443 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 ZNF248Q8NDW4 579 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 OR5M3Q8NGP4 307 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 NCSTNQ92542 709 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 BRD7Q9NPI1 651 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 ING3Q9NXR8 418 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 ANKMY1Q9P2S6 941 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 MKL2Q9ULH7 1088 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 A0A075B6Q4 140 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 ANTXRLA6NF34 631 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 RFXAPO00287 272 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 ETHE1O95571 254 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 BMP1P13497 986 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 PVRP15151 417 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 P2RY2P41231 377 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 PYCR3Q53H96 274 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 CCNJQ5T5M9 372 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 TANGO2Q6ICL3 276 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 CCBE1Q6UXH8 406 aaPredicted RBP14.87□□□□□ -0.03
CUX1-211ENST00000546411 OR8D2Q9GZM6 311 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 SLC6A17Q9H1V8 727 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 STARD5Q9NSY2 213 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 TAS2R7Q9NYW3 318 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 CLCA3PQ9Y6N3 262 aa14.87□□□□□ -0.03
CUX1-211ENST00000546411 KIF13BQ9NQT8 1826 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 FUOMA2VDF0 154 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 PRRT4C9JH25 899 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 XKRYO14609 159 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 CPNE3O75131 537 aaKnown RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 DHFRP00374 187 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 CAPNS1P04632 268 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 ITIH1P19827 911 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 GGT2P36268 569 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 ADARB1P78563 741 aaKnown RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 B4GALNT1Q00973 533 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 EIF2B5Q13144 721 aaKnown RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 SPATC1Q76KD6 591 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 TMEM179BQ7Z7N9 219 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 OR52E1Q8NGJ3 308 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 WDR92Q96MX6 357 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 NIPSNAP1Q9BPW8 284 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 POLMQ9NP87 494 aaPredicted RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 SEC14L4Q9UDX3 406 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 PCDHGA2Q9Y5H1 932 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 CSNK1G3Q9Y6M4 447 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 CD8B2A6NJW9 211 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 RAB36O95755 333 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 CD8BP10966 210 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 SHC2P98077 582 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 ZNF750Q32MQ0 723 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 FLYWCH1Q4VC44 716 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 ALG1LQ6GMV1 187 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 SLC36A4Q6YBV0 504 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 ZNF517Q6ZMY9 492 aaPredicted RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 BCDIN3DQ7Z5W3 292 aaKnown RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 ADGRD2Q7Z7M1 963 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 OAFQ86UD1 273 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 CYB561A3Q8NBI2 242 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 CCDC115Q96NT0 180 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 RHNO1Q9BSD3 238 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 SPATA9Q9BWV2 254 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 MAFFQ9ULX9 164 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 CARD8Q9Y2G2 431 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 PRAMEF33A0A0G2JMD5 474 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 KLK8O60259 260 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 PRAMEF10O60809 474 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 JRKO75564 520 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 SLCO2B1O94956 709 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 HLA-DPB1P04440 258 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 NTSR1P30989 418 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 NAA10P41227 235 aaPredicted RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 ENPP2Q13822 863 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 KEAP1Q14145 624 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 NKG7Q16617 165 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 FCRLBQ6BAA4 426 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 B3GLCTQ6Y288 498 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 KLBQ86Z14 1044 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 OR13F1Q8NGS4 319 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 SUN3Q8TAQ9 357 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 PHOSPHO1Q8TCT1 267 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 TREX2Q9BQ50 279 aaPredicted RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 CXorf36Q9H7Y0 433 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 MKKSQ9NPJ1 570 aaPredicted RBP14.86□□□□□ -0.03
CUX1-211ENST00000546411 HSPE1-MOB4S4R3N1 261 aa14.86□□□□□ -0.03
CUX1-211ENST00000546411 ELOA3DA6NLF2 546 aaPredicted RBP14.85□□□□□ -0.03
CUX1-211ENST00000546411 NOS1APO75052 506 aaPredicted RBP14.85□□□□□ -0.03
CUX1-211ENST00000546411 TNFP01375 233 aa14.85□□□□□ -0.03
CUX1-211ENST00000546411 OSMP13725 252 aa14.85□□□□□ -0.03
CUX1-211ENST00000546411 GJA4P35212 333 aa14.85□□□□□ -0.03
CUX1-211ENST00000546411 ACVR1BP36896 505 aa14.85□□□□□ -0.03
CUX1-211ENST00000546411 TAF13Q15543 124 aa14.85□□□□□ -0.03
CUX1-211ENST00000546411 CTU2Q2VPK5 515 aaKnown RBP14.85□□□□□ -0.03
CUX1-211ENST00000546411 ELOA3BQ3SY89 546 aa14.85□□□□□ -0.03
CUX1-211ENST00000546411 ADIPOR2Q86V24 386 aa14.85□□□□□ -0.03
CUX1-211ENST00000546411 DENND6BQ8NEG7 585 aa14.85□□□□□ -0.03
CUX1-211ENST00000546411 ELOA3Q8NG57 546 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms