RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TRADDQ15628 312 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 EIPR1Q53HC9 387 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 UBAP2Q5T6F2 1119 aaKnown RBP11.47□□□□□ -0.57
COPS7A-221ENST00000546229 GRTP1Q5TC63 336 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 FAM219BQ5XKK7 198 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 DESI1Q6ICB0 168 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 C3orf62Q6ZUJ4 267 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 MAATS1Q7Z4T9 603 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 C9orf106Q8NAJ2 232 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 SIMC1Q8NDZ2 872 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 HGDQ93099 445 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 GNRHR2Q96P88 292 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 NAPGQ99747 312 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-221ENST00000546229 EXO5Q9H790 373 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 NMRAL1Q9HBL8 299 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 ALKBH4Q9NXW9 302 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 FETUBQ9UGM5 382 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 ZNF639Q9UID6 485 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 CES1P1Q9UKY3 287 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 SLC6A5Q9Y345 797 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 RNF11Q9Y3C5 154 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 NPFFR2Q9Y5X5 522 aa11.47□□□□□ -0.57
COPS7A-221ENST00000546229 RAI1Q7Z5J4 1906 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-221ENST00000546229 FBN3Q75N90 2809 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 C15orf38-AP3S2A0A0A6YYH1 394 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 IQANK1A0A1B0GTG1 560 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 FAM187AA6NFU0 413 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 FOXE1O00358 373 aaPredicted RBP11.46□□□□□ -0.57
COPS7A-221ENST00000546229 OR7A17O14581 309 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 OR10H2O60403 315 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 SIX3O95343 332 aaPredicted RBP11.46□□□□□ -0.57
COPS7A-221ENST00000546229 GBAP04062 536 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.57
COPS7A-221ENST00000546229 FOSL1P15407 271 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 BMP7P18075 431 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 PTX3P26022 381 aaPredicted RBP11.46□□□□□ -0.57
COPS7A-221ENST00000546229 ABCD3P28288 659 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 CRABP2P29373 138 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 HOXC12P31275 282 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 NEK2P51955 445 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 RAP1GDS1P52306 607 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 NAGLUP54802 743 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 DUSP2Q05923 314 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 TRAF3Q13114 568 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 SLMAPQ14BN4 828 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 OR52E8Q6IFG1 317 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 GOLGA7Q7Z5G4 137 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 NUDT13Q86X67 352 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 MED12LQ86YW9 2145 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 GALNT12Q8IXK2 581 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 WFDC11Q8NEX6 87 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 OR52B6Q8NGF0 335 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 FBXO25Q8TCJ0 367 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 RNF138Q8WVD3 245 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 DIO2Q92813 273 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 JSRP1Q96MG2 331 aaPredicted RBP11.46□□□□□ -0.57
COPS7A-221ENST00000546229 NXF5Q9H1B4 397 aaKnown RBP11.46□□□□□ -0.57
COPS7A-221ENST00000546229 ZBTB26Q9HCK0 441 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 SNX15Q9NRS6 342 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 FOXD3Q9UJU5 478 aaPredicted RBP11.46□□□□□ -0.57
COPS7A-221ENST00000546229 PCDHGA11Q9Y5H2 935 aa11.46□□□□□ -0.57
COPS7A-221ENST00000546229 A0A1B0GTL3 188 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 C2orf92A0A1B0GVN3 265 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 CCDC189A1A4V9 331 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 DYRK3O43781 588 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 SNX4O95219 450 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 ACSL3O95573 720 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 IL18BPO95998 194 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 RAF1P04049 648 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 ALDOAP04075 364 aaKnown RBP11.45□□□□□ -0.58
COPS7A-221ENST00000546229 HRGP04196 525 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 C2P06681 752 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 ABCB1P08183 1280 aaPredicted RBP11.45□□□□□ -0.58
COPS7A-221ENST00000546229 EPXP11678 715 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 TLX1P31314 330 aaPredicted RBP11.45□□□□□ -0.58
COPS7A-221ENST00000546229 MAGEA12P43365 314 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 PIK3CGP48736 1102 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 ALDH18A1P54886 795 aaKnown RBP11.45□□□□□ -0.58
COPS7A-221ENST00000546229 GNG11P61952 73 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 FOXF2Q12947 444 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 NAB1Q13506 487 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 PFKFB4Q16877 469 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 DEFB113Q30KQ7 82 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 TECRLQ5HYJ1 363 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 TIGD3Q6B0B8 471 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 CAMKMTQ7Z624 323 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 TBC1D1Q86TI0 1168 aaPredicted RBP11.45□□□□□ -0.58
COPS7A-221ENST00000546229 CXorf67Q86X51 503 aaPredicted RBP11.45□□□□□ -0.58
COPS7A-221ENST00000546229 CTAGE3PQ8IX95 158 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 PM20D2Q8IYS1 436 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 PRR22Q8IZ63 422 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 TAGAPQ8N103 731 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 LIX1Q8N485 282 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 PPM1NQ8N819 430 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 FBF1Q8TES7 1133 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 ISL2Q96A47 359 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 CTHRC1Q96CG8 243 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 HSPBAP1Q96EW2 488 aa11.45□□□□□ -0.58
COPS7A-221ENST00000546229 UCN2Q96RP3 112 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms