RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.02■□□□□ 0.64
HMGA2-211ENST00000545998 MAPRE3Q9UPY8 281 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 GPR45Q9Y5Y3 372 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 LAMP1P11279 417 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 DDX5P17844 614 aaKnown RBP19.02■□□□□ 0.63
HMGA2-211ENST00000545998 MLF1P58340 268 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 MRPS35P82673 323 aaKnown RBP19.02■□□□□ 0.63
HMGA2-211ENST00000545998 TRMT12Q53H54 448 aaKnown RBP19.02■□□□□ 0.63
HMGA2-211ENST00000545998 CPTPQ5TA50 214 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 ABHD17BQ5VST6 288 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 CAMKMTQ7Z624 323 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 ZNF615Q8N8J6 731 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 THAP3Q8WTV1 239 aaPredicted RBP19.02■□□□□ 0.63
HMGA2-211ENST00000545998 STON2Q8WXE9 905 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 THOC1Q96FV9 657 aaKnown RBP19.02■□□□□ 0.63
HMGA2-211ENST00000545998 DPY30Q9C005 99 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 OR10A5Q9H207 317 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 EPS8L2Q9H6S3 715 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 NPHS2Q9NP85 383 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 FGFR1OP2Q9NVK5 253 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 STMN3Q9NZ72 180 aa19.02■□□□□ 0.63
HMGA2-211ENST00000545998 RALYQ9UKM9 306 aaKnown RBP19.02■□□□□ 0.63
HMGA2-211ENST00000545998 OR6C76A6NM76 312 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 POLR3GO15318 223 aaPredicted RBP19.01■□□□□ 0.63
HMGA2-211ENST00000545998 CBX7O95931 251 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 VIMP08670 466 aaKnown RBP19.01■□□□□ 0.63
HMGA2-211ENST00000545998 CD97P48960 835 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 DUSP8Q13202 625 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 SIMC1Q8NDZ2 872 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 RFWD2Q8NHY2 731 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 TM9SF4Q92544 642 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 KAT2AQ92830 837 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 ERP27Q96DN0 273 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 ZBED6CLQ96FA7 236 aaPredicted RBP19.01■□□□□ 0.63
HMGA2-211ENST00000545998 PRPF18Q99633 342 aaKnown RBP19.01■□□□□ 0.63
HMGA2-211ENST00000545998 SIKE1Q9BRV8 207 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 CCDC28BQ9BUN5 200 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 ACSS1Q9NUB1 689 aaPredicted RBP19.01■□□□□ 0.63
HMGA2-211ENST00000545998 ATAD3AQ9NVI7 634 aa19.01■□□□□ 0.63
HMGA2-211ENST00000545998 UBDO15205 165 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 IDO1P14902 403 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 EBPQ15125 230 aaKnown RBP19■□□□□ 0.63
HMGA2-211ENST00000545998 GSTA3Q16772 222 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 SOWAHCQ53LP3 525 aaPredicted RBP19■□□□□ 0.63
HMGA2-211ENST00000545998 FHL5Q5TD97 284 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 ZNF551Q7Z340 670 aaPredicted RBP19■□□□□ 0.63
HMGA2-211ENST00000545998 BEST3Q8N1M1 668 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 OR5L2Q8NGL0 311 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 NUBPLQ8TB37 319 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 MARK4Q96L34 752 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 TEX37Q96LM6 180 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 BHLHE41Q9C0J9 482 aaPredicted RBP19■□□□□ 0.63
HMGA2-211ENST00000545998 RNF32Q9H0A6 362 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 LIN28AQ9H9Z2 209 aaKnown RBP19■□□□□ 0.63
HMGA2-211ENST00000545998 MYOTQ9UBF9 498 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 DCTN4Q9UJW0 460 aa19■□□□□ 0.63
HMGA2-211ENST00000545998 PLOD3O60568 738 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 DPM1O60762 260 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 SLITRK5O94991 958 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 WDPCPO95876 746 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 CLNS1AP54105 237 aaKnown RBP18.99■□□□□ 0.63
HMGA2-211ENST00000545998 MANFP55145 182 aaKnown RBP18.99■□□□□ 0.63
HMGA2-211ENST00000545998 NME5P56597 212 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 UFM1P61960 85 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 EXOSC7Q15024 291 aaKnown RBP18.99■□□□□ 0.63
HMGA2-211ENST00000545998 C16orf47Q6ZP98 133 aaPredicted RBP18.99■□□□□ 0.63
HMGA2-211ENST00000545998 SLC29A4Q7RTT9 530 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 ZADH2Q8N4Q0 377 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 NATD1Q8N6N6 113 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 RBMXL3Q8N7X1 1067 aaKnown RBP18.99■□□□□ 0.63
HMGA2-211ENST00000545998 OR7G2Q8NG99 324 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 C16orf52Q8NHV5 167 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 HAS2Q92819 552 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 TESCQ96BS2 214 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 ZNF317Q96PQ6 595 aaPredicted RBP18.99■□□□□ 0.63
HMGA2-211ENST00000545998 WWTR1Q9GZV5 400 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 CLMPQ9H6B4 373 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 ANKRA2Q9H9E1 313 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 PLA2G3Q9NZ20 509 aa18.99■□□□□ 0.63
HMGA2-211ENST00000545998 E9PBE3 544 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 PLOD2O00469 737 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 ITGA10O75578 1167 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 HSPB3Q12988 150 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 MLC1Q15049 377 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 PDCD4Q53EL6 469 aaKnown RBP18.98■□□□□ 0.63
HMGA2-211ENST00000545998 CGB2Q6NT52 195 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 TMEM107Q6UX40 140 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 OR52R1Q8NGF1 315 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 OR8J2Q8NGG1 315 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 ZFP28Q8NHY6 868 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 DUSP26Q9BV47 211 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 SDR39U1Q9NRG7 319 aaPredicted RBP18.98■□□□□ 0.63
HMGA2-211ENST00000545998 ABI3Q9P2A4 366 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 BCAP29Q9UHQ4 241 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 CSAG2Q9Y5P2 127 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 A0A087WV62 115 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 DYTNA2CJ06 578 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 WWP2O00308 870 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 CDK2AP1O14519 115 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 FCHO1O14526 889 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms