RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 PRODH2Q9UF12 536 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 ZNF451Q9Y4E5 1061 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 PCDHB14Q9Y5E9 798 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 ACACAQ13085 2346 aa14.96□□□□□ -0.01
PRPF40A-212ENST00000545856 DUXAA6NLW8 204 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 C17orf105B2RV13 164 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 TGFBR3LH3BV60 316 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 GYG2O15488 501 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 ADRB1P08588 477 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC6A2P23975 617 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 PRIM2P49643 509 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 OR4D2P58180 307 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 PSME3P61289 254 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 MGAT2Q10469 447 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 ERV3-1Q14264 604 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 EXT1Q16394 746 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 SPDYE7PQ495Y7 208 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 SAXO2Q658L1 398 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 FAM199XQ6PEV8 388 aaPredicted RBP14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 CPEB2Q7Z5Q1 589 aaKnown RBP14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 LAPTM4BQ86VI4 370 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 TMEM151BQ8IW70 566 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 OR52N2Q8NGI0 321 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 OR8K3Q8NH51 312 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 TSLPQ969D9 159 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC7A6OSQ96CW6 309 aaPredicted RBP14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 FAM120BQ96EK7 910 aaKnown RBP14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC35A5Q9BS91 424 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 CXorf36Q9H7Y0 433 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 AKIRIN1Q9H9L7 192 aaPredicted RBP14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 ZCCHC3Q9NUD5 404 aaKnown RBP14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 VAPAQ9P0L0 249 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 COPS7AQ9UBW8 275 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 KLK13Q9UKR3 277 aa14.96□□□□□ -0.02
PRPF40A-212ENST00000545856 WDFY3Q8IZQ1 3526 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 TEX51A0A1B0GUA7 166 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 CLIC1O00299 241 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 UMODP07911 640 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 BMP2P12643 396 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 ICAM2P13598 275 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 CD1EP15812 388 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 GPX2P18283 190 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 TNNI3P19429 210 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 CHI3L1P36222 383 aaPredicted RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 CDK9P50750 372 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 EEFSECP57772 596 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 DCAF7P61962 342 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 DUSP2Q05923 314 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 TP53BP2Q13625 1128 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 SAMD4BQ5PRF9 694 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 FHL5Q5TD97 284 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 NANOGP8Q6NSW7 305 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 SERPINA11Q86U17 422 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 METTL25Q8N6Q8 603 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 CDRT4Q8N9R6 151 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 ZNF248Q8NDW4 579 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 C17orf47Q8NEP4 570 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 TNIP2Q8NFZ5 429 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 SNIP1Q8TAD8 396 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 PTPMT1Q8WUK0 201 aaPredicted RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 NUDT8Q8WV74 236 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 HOXB13Q92826 284 aaPredicted RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 FGF11Q92914 225 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 CPPED1Q9BRF8 314 aaPredicted RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 INPP5KQ9BT40 448 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 DPH1Q9BZG8 443 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 TRIM4Q9C037 500 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 SEMA4CQ9C0C4 833 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 ZNF700Q9H0M5 742 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 EPS8L2Q9H6S3 715 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 NANOGQ9H9S0 305 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 GPN2Q9H9Y4 310 aaPredicted RBP14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC25A37Q9NYZ2 338 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 L3MBTL1Q9Y468 752 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 PCDHGB3Q9Y5G1 929 aa14.95□□□□□ -0.02
PRPF40A-212ENST00000545856 UPK1AO00322 258 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 IGKV3-11P04433 115 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 SOAT1P35610 550 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 MC3RP41968 323 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 CDKN2CP42773 168 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 CPA2P48052 419 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 NCALDP61601 193 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 ID2Q02363 134 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 GAB1Q13480 694 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 SFT2D3Q587I9 215 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 ERICH5Q6P6B1 374 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 TMEM107Q6UX40 140 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 BNC2Q6ZN30 1099 aaPredicted RBP14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 ASRGL1Q7L266 308 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 GPR155Q7Z3F1 870 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC30A8Q8IWU4 369 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 MSRB3Q8IXL7 192 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 PRSS58Q8IYP2 241 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 B3GNT7Q8NFL0 401 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 OR1N1Q8NGS0 311 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 POP5Q969H6 163 aaKnown RBP14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 VMP1Q96GC9 406 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 STACQ99469 402 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 TMEM181Q9P2C4 612 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms