RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 IP6K3Q96PC2 410 aa15.15■□□□□ 0.02
LIMS2-217ENST00000545738 INPP5KQ9BT40 448 aa15.15■□□□□ 0.02
LIMS2-217ENST00000545738 CXorf36Q9H7Y0 433 aa15.15■□□□□ 0.02
LIMS2-217ENST00000545738 LIN28AQ9H9Z2 209 aaKnown RBP15.15■□□□□ 0.02
LIMS2-217ENST00000545738 ACSS1Q9NUB1 689 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-217ENST00000545738 TRIM33Q9UPN9 1127 aa15.15■□□□□ 0.02
LIMS2-217ENST00000545738 CNTRLQ7Z7A1 2325 aa15.15■□□□□ 0.02
LIMS2-217ENST00000545738 KMT2BQ9UMN6 2715 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-217ENST00000545738 ATRXP46100 2492 aa15.15■□□□□ 0.02
LIMS2-217ENST00000545738 TNRC6AQ8NDV7 1962 aaKnown RBP15.15■□□□□ 0.02
LIMS2-217ENST00000545738 A0A1W2PRB8 838 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 FAM234BA2RU67 622 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 UPK1AO00322 258 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 FCHO1O14526 889 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 MPIP34949 423 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 RPL3P39023 403 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 STX1BP61266 288 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 SRSF11Q05519 484 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 MAP4K2Q12851 820 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 VPS26BQ4G0F5 336 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 TREML1Q86YW5 311 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 FAM9CQ8IZT9 166 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 TMEM102Q8N9M5 508 aaPredicted RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 DAZLQ92904 295 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 EXTL1Q92935 676 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 ELP4Q96EB1 424 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 ZBED6CLQ96FA7 236 aaPredicted RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 MYLK2Q9H1R3 596 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 GIMAP4Q9NUV9 329 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 CPAMD8Q8IZJ3 1885 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 A6NL46 340 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 NR5A2O00482 541 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 RNASET2O00584 256 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 ZNF354AO60765 605 aaPredicted RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 ABCB1P08183 1280 aaPredicted RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 S100A3P33764 101 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 MANFP55145 182 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 KLF10Q13118 480 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 BIKQ13323 160 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 GAB1Q13480 694 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 MLC1Q15049 377 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 TBR1Q16650 682 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 COL28A1Q2UY09 1125 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 B3GNTL1Q67FW5 361 aaPredicted RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 FCRLBQ6BAA4 426 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 SLC2A7Q6PXP3 512 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 SAMD14Q8IZD0 417 aaPredicted RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 GLB1L3Q8NCI6 653 aaPredicted RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 MORN4Q8NDC4 146 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 PSMA8Q8TAA3 256 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 BRIX1Q8TDN6 353 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 THOC3Q96J01 351 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 OR52E6Q96RD3 313 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 PRPF18Q99633 342 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 PELOQ9BRX2 385 aaKnown RBP15.14■□□□□ 0.01
LIMS2-217ENST00000545738 CCDC106Q9BWC9 280 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 MMP25Q9NPA2 562 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 ATAD3AQ9NVI7 634 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 SLAMF8Q9P0V8 285 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 CACNA1BQ00975 2339 aa15.14■□□□□ 0.01
LIMS2-217ENST00000545738 TRBV11-1A0A0K0K1C0 115 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 PSMG1O95456 288 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 SERPINA7P05543 415 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 PTPN6P29350 595 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 EMDP50402 254 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 AIMP2Q13155 320 aaKnown RBP15.13■□□□□ 0.01
LIMS2-217ENST00000545738 TLR1Q15399 786 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 DPY19L1Q2PZI1 675 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 PAGE3Q5JUK9 113 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 RETREG3Q86VR2 466 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 APLFQ8IW19 511 aaPredicted RBP15.13■□□□□ 0.01
LIMS2-217ENST00000545738 OR2L13Q8N349 312 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 GALNT16Q8N428 558 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 SIRT6Q8N6T7 355 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 FDCSPQ8NFU4 85 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 OR52R1Q8NGF1 315 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 C16orf52Q8NHV5 167 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 M1APQ8TC57 530 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 THAP3Q8WTV1 239 aaPredicted RBP15.13■□□□□ 0.01
LIMS2-217ENST00000545738 MAGED4Q96JG8 741 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 FER1L6-AS2Q96M78 137 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 OR10A5Q9H207 317 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 ZBTB20Q9HC78 741 aaPredicted RBP15.13■□□□□ 0.01
LIMS2-217ENST00000545738 KALRNO60229 2985 aa15.13■□□□□ 0.01
LIMS2-217ENST00000545738 ZFYVE26Q68DK2 2539 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 PRSS51A0A1B0GVH4 220 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 PLOD2O00469 737 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 PLOD3O60568 738 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 IL6P05231 212 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 CCL11P51671 97 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 EXT1Q16394 746 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 LINC00303Q3SY05 128 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 GTDC1Q4AE62 458 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 WDR53Q7Z5U6 358 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-217ENST00000545738 CLEC1AQ8NC01 280 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 OR5AK3PQ8NH89 298 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 OR5P2Q8WZ92 322 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 SPDL1Q96EA4 605 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 FAM120BQ96EK7 910 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms