RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NBPF5PQ86XG9 351 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-224ENST00000545688 FER1L6-AS2Q96M78 137 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 LMAN1LQ9HAT1 526 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 ZNF275Q9NSD4 429 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-224ENST00000545688 CDH23Q9H251 3354 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 ZNF609O15014 1411 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 UBR2Q8IWV8 1755 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 ABCC12Q96J65 1359 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 IBTKQ9P2D0 1353 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-224ENST00000545688 A0A0B4J203 849 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 C2orf92A0A1B0GVN3 265 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 OR5H15A6NDH6 313 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 TSC22D2O75157 780 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 OR9G9P0C7N8 305 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 OR3A1P47881 315 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 ABRAXAS2Q15018 415 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 C17orf58Q2M2W7 97 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 SLC10A5Q5PT55 438 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 RPUSD3Q6P087 351 aaKnown RBP3.24□□□□□ -1.89
SNHG1-224ENST00000545688 KRT74Q7RTS7 529 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 MEX3DQ86XN8 651 aaKnown RBP3.24□□□□□ -1.89
SNHG1-224ENST00000545688 CCDC71Q8IV32 467 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-224ENST00000545688 ELMOD1Q8N336 334 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 C8orf46Q8TAG6 207 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.24□□□□□ -1.89
SNHG1-224ENST00000545688 PDRG1Q9NUG6 133 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 CLIC5Q9NZA1 410 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 CLEC4EQ9ULY5 219 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 ATP6V0A2Q9Y487 856 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 RBBP6Q7Z6E9 1792 aaKnown RBP3.24□□□□□ -1.89
SNHG1-224ENST00000545688 PIEZO1Q92508 2521 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 CEMIPQ8WUJ3 1361 aa3.24□□□□□ -1.89
SNHG1-224ENST00000545688 A0A087WV48 116 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 TMCO5BA8MYB1 307 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 SKILP12757 684 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 PDGFRAP16234 1089 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 RGRP47804 291 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 ABRQ12979 859 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 GPR50Q13585 617 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 CEACAM7Q14002 265 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 LIPJQ5W064 366 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 C16orf54Q6UWD8 224 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 NLRP14Q86W24 1093 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 CREBRFQ8IUR6 639 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 ZNF525Q8N782 197 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 TMEM99Q8N816 258 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 SMYD1Q8NB12 490 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 CLEC1AQ8NC01 280 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 KIF18AQ8NI77 898 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 GPR148Q8TDV2 347 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 RIT1Q92963 219 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 PRMT1Q99873 361 aaKnown RBP3.23□□□□□ -1.89
SNHG1-224ENST00000545688 CCM2Q9BSQ5 444 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 CENPOQ9BU64 300 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 TRIM7Q9C029 511 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 UBA5Q9GZZ9 404 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 S100A14Q9HCY8 104 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 USP16Q9Y5T5 823 aa3.23□□□□□ -1.89
SNHG1-224ENST00000545688 ERVV-1B6SEH8 477 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 BBOX1O75936 387 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 ADRA2CP18825 462 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 RPS12P25398 132 aaKnown RBP3.22□□□□□ -1.89
SNHG1-224ENST00000545688 ID1P41134 155 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 ALDH3B1P43353 468 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 MEOX2P50222 304 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 NAGLUP54802 743 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 CETN1Q12798 172 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 KHDRBS2Q5VWX1 349 aaKnown RBP3.22□□□□□ -1.89
SNHG1-224ENST00000545688 FAM91A1Q658Y4 838 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 CCDC186Q7Z3E2 898 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 PHLDB2Q86SQ0 1253 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 SLC22A18ASQ8N1D0 253 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 BEST4Q8NFU0 473 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 SAP25Q8TEE9 199 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 ZBED6CLQ96FA7 236 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-224ENST00000545688 SIGLEC12Q96PQ1 595 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 ASB8Q9H765 288 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 MED17Q9NVC6 651 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 ZNF446Q9NWS9 450 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 CHCHD3Q9NX63 227 aaKnown RBP3.22□□□□□ -1.89
SNHG1-224ENST00000545688 VNN3Q9NY84 501 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 AKAP11Q9UKA4 1901 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 RTL9Q8NET4 1388 aa3.22□□□□□ -1.89
SNHG1-224ENST00000545688 UBN2Q6ZU65 1347 aa3.21□□□□□ -1.89
SNHG1-224ENST00000545688 DUOX1Q9NRD9 1551 aa3.21□□□□□ -1.89
SNHG1-224ENST00000545688 KIF20BQ96Q89 1820 aa3.21□□□□□ -1.89
SNHG1-224ENST00000545688 PAPPA2Q9BXP8 1791 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 TSPY2A6NKD2 308 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 NEDD8-MDP1E9PL57 170 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 SCO2O43819 266 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 GBAP04062 536 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 PTAFRP25105 342 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 ACKR3P25106 362 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 HMGCLP35914 325 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 NPY4RP50391 375 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 RAD23AP54725 363 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 HERC4Q5GLZ8 1057 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-224ENST00000545688 SPOUT1Q5T280 376 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms