RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ZNF750Q32MQ0 723 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 BEX5Q5H9J7 111 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 NHSL2Q5HYW2 709 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 FAM182AQ5T1J6 154 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 THEMIS2Q5TEJ8 643 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 HECTD2Q5U5R9 776 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 LRRC38Q5VT99 294 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 SLC22A10Q63ZE4 541 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 PTRHD1Q6GMV3 140 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 AFTPHQ6ULP2 937 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 HSDL2Q6YN16 418 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 SH2D5Q6ZV89 423 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 VN1R4Q7Z5H5 301 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ASPGQ86U10 573 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 LRRC56Q8IYG6 542 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 DND1Q8IYX4 353 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 PQLC1Q8N2U9 271 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 LRRC25Q8N386 305 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 RASGEF1CQ8N431 466 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 RFLNBQ8N5W9 214 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 OR8K3Q8NH51 312 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ZCCHC10Q8TBK6 192 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ZPLD1Q8TCW7 415 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 CFHR4Q92496 578 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 CAVIN3Q969G5 261 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 NCLNQ969V3 563 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ART5Q96L15 291 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 MRGPRX4Q96LA9 322 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 WFIKKN1Q96NZ8 548 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 QKIQ96PU8 341 aaKnown RBP eCLIP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 RASL10BQ96S79 203 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 TIMP4Q99727 224 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 APOL2Q9BQE5 337 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 SLC39A3Q9BRY0 314 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 RHNO1Q9BSD3 238 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ESRP2Q9H6T0 727 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 MANSC1Q9H8J5 431 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 SYNPO2LQ9H987 977 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 KLHL28Q9NXS3 571 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 TUBA8Q9NY65 449 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ELOVL5Q9NYP7 299 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 CTTNBP2NLQ9P2B4 639 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 LIMA1Q9UHB6 759 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ANAPC5Q9UJX4 755 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 PACSIN3Q9UKS6 424 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 CAMK2AQ9UQM7 478 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 MMACHCQ9Y4U1 282 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ANK2Q01484 3957 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 ATRQ13535 2644 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 IGKV3D-11A0A0A0MRZ8 115 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 A0A0G2JMM0 328 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 A0A1W2PPB8 328 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 A0A1W2PRS3 328 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 IQCF5A8MTL0 148 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 A8MUA0 341 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 KIR3DP1A8MWS1 328 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 WWP2O00308 870 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 PRMT5O14744 637 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-220ENST00000544550 HS3ST1O14792 307 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CHST10O43529 356 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 B3GALT2O43825 422 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 OR1I1O60431 355 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 LMX1BO60663 402 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CST8O60676 142 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 GALR3O60755 368 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-220ENST00000544550 MATN4O95460 622 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 GAS8O95995 478 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 AMY1AP04745 511 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CRHP06850 196 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 FESP07332 822 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 H2AFZP0C0S5 128 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 RNH1P13489 461 aaKnown RBP3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CYP4B1P13584 511 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 POU2F1P14859 743 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 GYPEP15421 78 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 PPP3CBP16298 524 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 ALOX12P18054 663 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 MAOAP21397 527 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CHMP24386 653 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 PSMA3P25788 255 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CTNNA2P26232 953 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 GDF1P27539 372 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CD79BP40259 229 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 TTPAP49638 278 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 GPR143P51810 404 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 MAP2K6P52564 334 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 WNT3P56703 355 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 DSCR9P59020 149 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 DUSP2Q05923 314 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 RGS1Q08116 209 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 LOXL1Q08397 574 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-220ENST00000544550 BMPR2Q13873 1038 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 TMEM249Q2WGJ8 235 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CCSMST1Q4G0I0 132 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 FASTKD1Q53R41 847 aaKnown RBP3.71□□□□□ -1.82
SNHG1-220ENST00000544550 XKR6Q5GH73 641 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CYB5R2Q6BCY4 276 aa3.71□□□□□ -1.82
SNHG1-220ENST00000544550 CAPN13Q6MZZ7 669 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF704Q6ZNC4 412 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-220ENST00000544550 H2AFVQ71UI9 128 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms