RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 PCLAFQ15004 111 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 PRICKLE4Q2TBC4 344 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 TBCELQ5QJ74 424 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 LYPD8Q6UX82 237 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 C10orf107Q8IVU9 208 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 SRRM1Q8IYB3 904 aaKnown RBP21.46■■□□□ 1.03
CHFR-222ENST00000544093 DOK4Q8TEW6 326 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 SMC6Q96SB8 1091 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 TMEM109Q9BVC6 243 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 TTTY12Q9BZ98 90 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 BRINP2Q9C0B6 783 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 SH2D2AQ9NP31 389 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 PLSCR2Q9NRY7 297 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 SENP1Q9P0U3 644 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 EML6Q6ZMW3 1958 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 TP53I11O14683 189 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 BCAS2O75934 225 aaPredicted RBP21.45■■□□□ 1.02
CHFR-222ENST00000544093 GLSO94925 669 aaPredicted RBP21.45■■□□□ 1.02
CHFR-222ENST00000544093 CLDN1O95832 211 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 IL3P08700 152 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 ANXA4P09525 319 aaPredicted RBP21.45■■□□□ 1.02
CHFR-222ENST00000544093 CT62P0C5K7 136 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 CCL3P10147 92 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 ZNF763Q0D2J5 394 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 C3AR1Q16581 482 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 NTRK2Q16620 822 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 HYAL4Q2M3T9 481 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 CMPK2Q5EBM0 449 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 RNF165Q6ZSG1 346 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 FBXW8Q8N3Y1 598 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 C16orf78Q8WTQ4 265 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 CNRIP1Q96F85 164 aaPredicted RBP21.45■■□□□ 1.02
CHFR-222ENST00000544093 CCDC120Q96HB5 630 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 ZNF681Q96N22 645 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 C12orf65Q9H3J6 166 aaKnown RBP21.45■■□□□ 1.02
CHFR-222ENST00000544093 ZDHHC11Q9H8X9 412 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 MAT2BQ9NZL9 334 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 SH3BGRL2Q9UJC5 107 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 TINAGQ9UJW2 476 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 ENTPD4Q9Y227 616 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 UNC79Q9P2D8 2635 aa21.45■■□□□ 1.02
CHFR-222ENST00000544093 CDC40O60508 579 aaKnown RBP eCLIP21.44■■□□□ 1.02
CHFR-222ENST00000544093 CHEK2O96017 543 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 PTGER1P34995 402 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 PTGS2P35354 604 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 NR0B1P51843 470 aaKnown RBP21.44■■□□□ 1.02
CHFR-222ENST00000544093 RPP38P78345 283 aaKnown RBP21.44■■□□□ 1.02
CHFR-222ENST00000544093 BTKQ06187 659 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 RPS6KA2Q15349 733 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 ERCC6LQ2NKX8 1250 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 MMP21Q8N119 569 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 FAM109AQ8N4B1 249 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 ZNF808Q8N4W9 903 aaPredicted RBP21.44■■□□□ 1.02
CHFR-222ENST00000544093 FAM13CQ8NE31 585 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 ZNF675Q8TD23 568 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 ADIPOR1Q96A54 375 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 CTHRC1Q96CG8 243 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 SECISBP2Q96T21 854 aaKnown RBP21.44■■□□□ 1.02
CHFR-222ENST00000544093 PARD6BQ9BYG5 372 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 PFDN4Q9NQP4 134 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 HEY2Q9UBP5 337 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 PRODH2Q9UF12 536 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.44■■□□□ 1.02
CHFR-222ENST00000544093 ZNF639Q9UID6 485 aa21.44■■□□□ 1.02
CHFR-222ENST00000544093 BOKQ9UMX3 212 aaPredicted RBP21.44■■□□□ 1.02
CHFR-222ENST00000544093 V9GYY5 206 aaPredicted RBP21.44■■□□□ 1.02
CHFR-222ENST00000544093 PINLYPA6NC86 204 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 ANKRD33BA6NCL7 494 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 NPIPB8E9PQR5 432 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 SLC28A1O00337 649 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 AGAP20933 346 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 S1PR1P21453 382 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 PRPH2P23942 346 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 SMSP52788 366 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 DCAF7P61962 342 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 KCNJ2P63252 427 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 MGAT2Q10469 447 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 FAM219BQ5XKK7 198 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 SCIMPQ6UWF3 145 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 IKBIPQ70UQ0 350 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 CHERPQ8IWX8 916 aaKnown RBP21.43■■□□□ 1.02
CHFR-222ENST00000544093 OR52N2Q8NGI0 321 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 FAM57AQ8TBR7 257 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 FAM111AQ96PZ2 611 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 GATA5Q9BWX5 397 aaPredicted RBP21.43■■□□□ 1.02
CHFR-222ENST00000544093 EBPLQ9BY08 206 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 EML4Q9HC35 981 aaKnown RBP21.43■■□□□ 1.02
CHFR-222ENST00000544093 BCAP29Q9UHQ4 241 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 MEMO1Q9Y316 297 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 NPFFR2Q9Y5X5 522 aa21.43■■□□□ 1.02
CHFR-222ENST00000544093 CHCHD2Q9Y6H1 151 aaPredicted RBP21.43■■□□□ 1.02
CHFR-222ENST00000544093 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.43■■□□□ 1.02
CHFR-222ENST00000544093 CENPEQ02224 2701 aa21.42■■□□□ 1.02
CHFR-222ENST00000544093 A0A0G2JMM0 328 aa21.42■■□□□ 1.02
CHFR-222ENST00000544093 A0A1B0GTH9 108 aa21.42■■□□□ 1.02
CHFR-222ENST00000544093 A0A1W2PPB8 328 aa21.42■■□□□ 1.02
CHFR-222ENST00000544093 A0A1W2PRS3 328 aa21.42■■□□□ 1.02
CHFR-222ENST00000544093 KIR3DP1A8MWS1 328 aa21.42■■□□□ 1.02
CHFR-222ENST00000544093 AZIN1O14977 448 aa21.42■■□□□ 1.02
CHFR-222ENST00000544093 ACOX3O15254 700 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms