RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 IGFALSP35858 605 aa18.47■□□□□ 0.55
SUDS3-204ENST00000543473 PKDCCQ504Y2 493 aa18.47■□□□□ 0.55
SUDS3-204ENST00000543473 SYT14Q8NB59 555 aa18.47■□□□□ 0.55
SUDS3-204ENST00000543473 TCEAL4Q96EI5 215 aa18.47■□□□□ 0.55
SUDS3-204ENST00000543473 GJD2Q9UKL4 321 aa18.47■□□□□ 0.55
SUDS3-204ENST00000543473 H7BY64 318 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 SEC13P55735 322 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 SLC22A10Q63ZE4 541 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 LRRTM4Q86VH4 590 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 PTRH1Q86Y79 214 aaKnown RBP18.46■□□□□ 0.55
SUDS3-204ENST00000543473 DCUN1D3Q8IWE4 304 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 FOXRED2Q8IWF2 684 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 POGLUT1Q8NBL1 392 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 CASTOR1Q8WTX7 329 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 PRAP1Q96NZ9 151 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 RETREG1Q9H6L5 497 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 TMEM185BQ9H7F4 350 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 PRRC2BQ5JSZ5 2229 aaKnown RBP18.46■□□□□ 0.55
SUDS3-204ENST00000543473 MEN1O00255 615 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 PGAM2P15259 253 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 PDHA2P29803 388 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 PCGF2P35227 344 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 ADPRMQ3LIE5 342 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 KCTD9Q7L273 389 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 CYB5D2Q8WUJ1 264 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 OTUB2Q96DC9 234 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 OR10A4Q9H209 315 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 FBXL3Q9UKT7 428 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 LOC105369274A0A096LPK9 316 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 COCHO43405 550 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 SCGNO76038 276 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 EVI2BP34910 448 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 CLCN7P51798 805 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 FAAH2Q6GMR7 532 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 OR4N4Q8N0Y3 316 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 CELF2-AS1Q8N7Q2 184 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 SIMC1Q8NDZ2 872 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 OR51A7Q8NH64 312 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 THEM6Q8WUY1 208 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 ABCD2Q9UBJ2 740 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 PRKACAP17612 351 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 CBLL1Q75N03 491 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 TOR1AIP2Q8NFQ8 470 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 CCDC120Q96HB5 630 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.46■□□□□ 0.559e-8■■■■□ 24.3
SUDS3-204ENST00000543473 CDH7Q9ULB5 785 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 BOLA1Q9Y3E2 137 aa18.46■□□□□ 0.55
SUDS3-204ENST00000543473 A0A1B0GVI7 797 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 TEX28O15482 410 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 LRRTM2O43300 516 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 GTF2F2P13984 249 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 FSHRP23945 695 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 CCDC58Q4VC31 144 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 MARCH8Q5T0T0 291 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 PYHIN1Q6K0P9 492 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 GRASPQ7Z6J2 395 aaPredicted RBP18.45■□□□□ 0.54
SUDS3-204ENST00000543473 COQ8BQ96D53 544 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 ASB4Q9Y574 426 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 KRT33AO76009 404 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 NDUFV2P19404 249 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 RPS5P46782 204 aaKnown RBP18.45■□□□□ 0.54
SUDS3-204ENST00000543473 PGDP52209 483 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 ACTC1P68032 377 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 ACTA1P68133 377 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 ZNF783Q6ZMS7 281 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 GALNT7Q86SF2 657 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 LYSMD2Q8IV50 215 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 OR8K3Q8NH51 312 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 ACPTQ9BZG2 426 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 CLMPQ9H6B4 373 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 IDUAP35475 653 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 FRMPD2BQ6IN97 320 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 Q6ZPB1 254 aaPredicted RBP18.45■□□□□ 0.54
SUDS3-204ENST00000543473 SH2D5Q6ZV89 423 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 MS4A15Q8N5U1 240 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 TXNDC15Q96J42 360 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 WNT6Q9Y6F9 365 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 BPIP17213 487 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 RAB3BP20337 219 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 ADAMTS16Q8TE57 1224 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 RELTQ969Z4 430 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 HSPA12BQ96MM6 686 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 KCNK12Q9HB15 430 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 ATPIF1Q9UII2 106 aa18.45■□□□□ 0.54
SUDS3-204ENST00000543473 COL22A1Q8NFW1 1626 aaPredicted RBP18.45■□□□□ 0.54
SUDS3-204ENST00000543473 LOC102723532A0A0G2JNH3 316 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 C2orf78A6NCI8 922 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 SLC22A31A6NKX4 558 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 UBFD1O14562 309 aaKnown RBP18.44■□□□□ 0.54
SUDS3-204ENST00000543473 CHRNB1P11230 501 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 TBPL1P62380 186 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 MINDY4Q4G0A6 757 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 LINC00299Q6ZSB3 139 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 ANKK1Q8NFD2 765 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 SUN3Q8TAQ9 357 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 GAL3ST4Q96RP7 486 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 SLC12A9Q9BXP2 914 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 SMG9Q9H0W8 520 aaKnown RBP18.44■□□□□ 0.54
SUDS3-204ENST00000543473 IL17CQ9P0M4 197 aa18.44■□□□□ 0.54
SUDS3-204ENST00000543473 PCDHGB2Q9Y5G2 931 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms