RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SLC25A30Q5SVS4 291 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 PRPF38BQ5VTL8 546 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ABHD17CQ6PCB6 329 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 YAF2Q8IY57 180 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 NLGN4XQ8N0W4 816 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 SRFBP1Q8NEF9 429 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 OR2L5Q8NG80 312 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 SLC7A13Q8TCU3 470 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 NR4A3Q92570 626 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 SCARF2Q96GP6 870 aaPredicted RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 PRRC1Q96M27 445 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 BBS4Q96RK4 519 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 MGLLQ99685 303 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 NEURL2Q9BR09 285 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 CDADC1Q9BWV3 514 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 C1QTNF7Q9BXJ2 289 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 LMAN2LQ9H0V9 348 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 KIR3DX1Q9H7L2 352 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 SLC6A20Q9NP91 592 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 C11orf16Q9NQ32 467 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 PNMA8BQ9ULN7 279 aaPredicted RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 LSM2Q9Y333 95 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 UGT2A1Q9Y4X1 527 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ASB4Q9Y574 426 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 HEBP2Q9Y5Z4 205 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 LAMA3Q16787 3333 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 A0A0G2JPF8 293 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 KRBA1A5PL33 1030 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 HNRNPCL2B2RXH8 293 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 HNRNPCL3B7ZW38 293 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 BOLA2-SMG1P6H3BVE0 249 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 SYT5O00445 386 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 PLRG1O43660 514 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ASNA1O43681 348 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ENTPD6O75354 484 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 UPK1BO75841 260 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 PAK4O96013 591 aaPredicted RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 TP53P04637 393 aaPredicted RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 FHP07954 510 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 HNRNPCL4P0DMR1 293 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ATP5A1P25705 553 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 IGFALSP35858 605 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ETV6P41212 452 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 RPS3AP61247 264 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 DAB2P98082 770 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ZNF45Q02386 682 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 FUT5Q11128 374 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 NCF4Q15080 339 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ZNF181Q2M3W8 571 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 LEXMQ3ZCV2 418 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 PERM1Q5SV97 790 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 MFSD4BQ5TF39 518 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 AGAP7PQ5VUJ5 663 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 CASP12Q6UXS9 341 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ATCAYQ86WG3 371 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 CACUL1Q86Y37 369 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 RBM45Q8IUH3 476 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 MFSD9Q8NBP5 474 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 OR2L3Q8NG85 312 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 OR5D16Q8NGK9 328 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 WDR36Q8NI36 951 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 VANGL1Q8TAA9 524 aaPredicted RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 KLHL6Q8WZ60 621 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 CDCA3Q99618 268 aaPredicted RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 PINK1Q9BXM7 581 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 POLDIP3Q9BY77 421 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 POLR2J3Q9H1A7 115 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 OR51E2Q9H255 320 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 XKR8Q9H6D3 395 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 PRDM7Q9NQW5 492 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 LUZP4Q9P127 313 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 ENTPD4Q9Y227 616 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 KCNK6Q9Y257 313 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 CFL2Q9Y281 166 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 RPL36Q9Y3U8 105 aaKnown RBP6.18□□□□□ -1.42
PTPRO-208ENST00000542557 CCDC88CQ9P219 2028 aa6.18□□□□□ -1.42
PTPRO-208ENST00000542557 C4orf51C9J302 202 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 HAT1O14929 419 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 PPM1DO15297 605 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ERI3O43414 337 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 NME6O75414 186 aaPredicted RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 LGI1O95970 557 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SCG5P05408 212 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SERPIND1P05546 499 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CHRM4P08173 479 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ADRA2AP08913 450 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 POU1F1P28069 291 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 PEBP1P30086 187 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SLAMF1Q13291 335 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SGCGQ13326 291 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ZNF425Q6IV72 752 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SLC48A1Q6P1K1 146 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 GDPGP1Q6ZNW5 385 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TRIM69Q86WT6 500 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 GJD3Q8N144 294 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ARL6IP6Q8N6S5 226 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ACOT4Q8N9L9 421 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 XAGE5Q8WWM1 108 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 UCN3Q969E3 161 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ELSPBP1Q96BH3 223 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms