RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 HSD3B7Q9H2F3 369 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 Q9H8V8 135 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 SP140LQ9H930 580 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 NTN4Q9HB63 628 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 TM9SF3Q9HD45 589 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 HPS4Q9NQG7 708 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 GLRX2Q9NS18 164 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 GPR173Q9NS66 373 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 TAS2R3Q9NYW6 316 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 STMN3Q9NZ72 180 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 HACD3Q9P035 362 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 SENP1Q9P0U3 644 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 TRMT6Q9UJA5 497 aaKnown RBP2.9□□□□□ -1.95
USP28-210ENST00000542033 RPL26L1Q9UNX3 145 aaKnown RBP2.9□□□□□ -1.95
USP28-210ENST00000542033 STK38LQ9Y2H1 464 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 RIPK3Q9Y572 518 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 HEY1Q9Y5J3 304 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 FHOD3Q2V2M9 1422 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 MROH2BQ7Z745 1585 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 TAF1P21675 1872 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 GRIN2DO15399 1336 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 NPHP3Q7Z494 1330 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 PCDH11YQ9BZA8 1340 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 PARD3Q8TEW0 1356 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CUX1P39880 1505 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CFAP43Q8NDM7 1665 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 C15orf38-AP3S2A0A0A6YYH1 394 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 SH3PXD2BA1X283 911 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 HSBP1L1C9JCN9 74 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 SLC9A3R1O14745 358 aaPredicted RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 POLR1CO15160 346 aaPredicted RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 RIPK2O43353 540 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 ZG16O60844 167 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PSIP1O75475 530 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 TRMUO75648 421 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 ATP5HO75947 161 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 EML2O95834 649 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 FAM107AO95990 144 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PAK4O96013 591 aaPredicted RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 IL6P05231 212 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 ASGR1P07306 291 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 ASNSP08243 561 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PABPC4LP0CB38 370 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 CCNA2P20248 432 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CA4P22748 312 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CA6P23280 308 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 MAGEA11P43364 429 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 STARP49675 285 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 TKTL1P51854 596 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 RAP1GDS1P52306 607 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 GNG2P59768 71 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 MYL6P60660 151 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 HTD2P86397 168 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 BEX3Q00994 111 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PMP22Q01453 160 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CACNG1Q06432 222 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 RAD51Q06609 339 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 IL10RBQ08334 325 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 FCHO2Q0JRZ9 810 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 ASPHQ12797 758 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 SGCGQ13326 291 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CUL2Q13617 745 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 DOC2AQ14183 400 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 STXBP2Q15833 593 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 RBBP7Q16576 425 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 UGP2Q16851 508 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 ODF4Q2M2E3 257 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 UGT3A2Q3SY77 523 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 FFAR4Q5NUL3 377 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 C6orf183Q5T699 404 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 FAM46CQ5VWP2 391 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 SUSD4Q5VX71 490 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 SLX4IPQ5VYV7 408 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 FAM53AQ6NSI3 398 aaPredicted RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 PRSS55Q6UWB4 352 aaPredicted RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 BTNL8Q6UX41 500 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 MACC1Q6ZN28 852 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 RBM43Q6ZSC3 357 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 CYP4V2Q6ZWL3 525 aaPredicted RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 SLC16A9Q7RTY1 509 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 NET1Q7Z628 596 aaPredicted RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 ASPGQ86U10 573 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 SERPINA12Q8IW75 414 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 BATF2Q8N1L9 274 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 KDM8Q8N371 416 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 NATD1Q8N6N6 113 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CCNYL1Q8N7R7 359 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 WDSUB1Q8N9V3 476 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 KIAA0895Q8NCT3 520 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 KBTBD8Q8NFY9 601 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 LHFPL5Q8TAF8 219 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 TMEM190Q8WZ59 177 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 SUSD6Q92537 303 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CCDC127Q96BQ5 260 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PYCR2Q96C36 320 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 TUBGCP3Q96CW5 907 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CHMP6Q96FZ7 201 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PGM2Q96G03 612 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 CNOT6LQ96LI5 555 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 VPS35Q96QK1 796 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms