RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	EGLN2	Q96KS0	407 aa		18.2	■□□□□ 0.5
ARF3-208	ENST00000541959	ATP6V1G3	Q96LB4	118 aa		18.2	■□□□□ 0.5
ARF3-208	ENST00000541959	C3orf30	Q96M34	536 aa		18.2	■□□□□ 0.5
ARF3-208	ENST00000541959	RASL10B	Q96S79	203 aa		18.2	■□□□□ 0.5
ARF3-208	ENST00000541959	C1orf50	Q9BV19	199 aa		18.2	■□□□□ 0.5
ARF3-208	ENST00000541959	SLC35C2	Q9NQQ7	365 aa		18.2	■□□□□ 0.5
ARF3-208	ENST00000541959	NPIPB8	E9PQR5	432 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	NEURL1	O76050	574 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	OR6B1	O95007	311 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	ATP1B1	P05026	303 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	SP1	P08047	785 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	SDC1	P18827	310 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	MAPK1	P28482	360 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	TRHR	P34981	398 aa	Predicted RBP	18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	SLC37A1	P57057	533 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	SRSF11	Q05519	484 aa	Known RBP	18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	EXOSC7	Q15024	291 aa	Known RBP	18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	RPUSD3	Q6P087	351 aa	Known RBP	18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	ARMC10	Q8N2F6	343 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	NUBPL	Q8TB37	319 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	SLC22A8	Q8TCC7	542 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	CCT7	Q99832	543 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	C20orf27	Q9GZN8	174 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	WWTR1	Q9GZV5	400 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	OR10A5	Q9H207	317 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	MAT2B	Q9NZL9	334 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	EHD3	Q9NZN3	535 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	BAIAP2L1	Q9UHR4	511 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	TMED5	Q9Y3A6	229 aa		18.19	■□□□□ 0.5
ARF3-208	ENST00000541959	C2orf92	A0A1B0GVN3	265 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	OR6C76	A6NM76	312 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	SNUPN	O95149	360 aa	Known RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	NTS	P30990	170 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	RPL14	P50914	215 aa	Known RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	MRPS35	P82673	323 aa	Known RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	MRPL49	Q13405	166 aa	Known RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	EBP	Q15125	230 aa	Known RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	INA	Q16352	499 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	PRICKLE4	Q2TBC4	344 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	TTMP	Q5BVD1	217 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	XKR7	Q5GH72	579 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	ATG16L1	Q676U5	607 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	IKBIP	Q70UQ0	350 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	TRIM42	Q8IWZ5	723 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	FAM9C	Q8IZT9	166 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	BCORP1	Q8N888	145 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	FNDC5	Q8NAU1	212 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	FAM98A	Q8NCA5	519 aa	Known RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	OR9A2	Q8NGT5	310 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	KAT2A	Q92830	837 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	ZNF681	Q96N22	645 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	SORT1	Q99523	831 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	BARD1	Q99728	777 aa	Known RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	OLAH	Q9NV23	265 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	PNPO	Q9NVS9	261 aa		18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	WBP11	Q9Y2W2	641 aa	Known RBP	18.18	■□□□□ 0.5
ARF3-208	ENST00000541959	CDK2AP1	O14519	115 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	CLPS	P04118	112 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	JUN	P05412	331 aa	Known RBP	18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	BCKDHA	P12694	445 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	PCSK2	P16519	638 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	MPI	P34949	423 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	NR0B1	P51843	470 aa	Known RBP	18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	NCBP2	P52298	156 aa	Known RBP eCLIP	18.17	■□□□□ 0.5	9e-10	■■□□□ 12
ARF3-208	ENST00000541959	SLC18A1	P54219	525 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	FUT7	Q11130	342 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	ELOA	Q14241	798 aa	Known RBP	18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	EIF2S3L	Q2VIR3	472 aa	Known RBP	18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	PIGG	Q5H8A4	983 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	FHL5	Q5TD97	284 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	ANKRD26P1	Q6NSI1	321 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	OPN5	Q6U736	354 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	LIX1	Q8N485	282 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	OR7G1	Q8NGA0	311 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	FAR1	Q8WVX9	515 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	SCMH1	Q96GD3	660 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	FCRL1	Q96LA6	429 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	TAAR6	Q96RI8	345 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	VIPAS39	Q9H9C1	493 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	TIMMDC1	Q9NPL8	285 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	SH3BP4	Q9P0V3	963 aa		18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	UTP20	O75691	2785 aa	Known RBP	18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	DIDO1	Q9BTC0	2240 aa	Known RBP	18.17	■□□□□ 0.5
ARF3-208	ENST00000541959	NME2P1	O60361	137 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	CBX6	O95503	412 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	CRYAB	P02511	175 aa	Known RBP	18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	NME2	P22392	152 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	ASMT	P46597	345 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	MGAT2	Q10469	447 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	MAP4K2	Q12851	820 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	PRSS53	Q2L4Q9	553 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	MPEG1	Q2M385	716 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	TRMT12	Q53H54	448 aa	Known RBP	18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	C6orf136	Q5SQH8	315 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	MDGA2	Q7Z553	956 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	ZNF227	Q86WZ6	799 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	KIRREL3	Q8IZU9	778 aa		18.16	■□□□□ 0.5
ARF3-208	ENST00000541959	ZNF615	Q8N8J6	731 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms