RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FAM219BQ5XKK7 198 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 ARL6IP6Q8N6S5 226 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 FIBINQ8TAL6 211 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 GIMAP1Q8WWP7 306 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 ZIM3Q96PE6 472 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 DEFB126Q9BYW3 111 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 RWDD1Q9H446 243 aaPredicted RBP4.32□□□□□ -1.72
YBX3-210ENST00000540975 RNF41Q9H4P4 317 aaPredicted RBP4.32□□□□□ -1.72
YBX3-210ENST00000540975 RNPEPL1Q9HAU8 725 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 MAGEF1Q9HAY2 307 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 ABCB8Q9NUT2 735 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 COMMD8Q9NX08 183 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 DCAF16Q9NXF7 216 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 CNIH4Q9P003 139 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 IKZF3Q9UKT9 509 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 FAM205AQ6ZU69 1335 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 SLC15A5A6NIM6 579 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 BOLA2-SMG1P6H3BVE0 249 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 STBD1O95210 358 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 MMP10P09238 476 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 TPBGLP0DKB5 382 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 STIP1P31948 543 aaKnown RBP4.31□□□□□ -1.72
YBX3-210ENST00000540975 MAGEA8P43361 318 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 TNFRSF4P43489 277 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 FNTAP49354 379 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 SERPINH1P50454 418 aaKnown RBP4.31□□□□□ -1.72
YBX3-210ENST00000540975 STXBP2Q15833 593 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 RELL2Q8NC24 303 aaPredicted RBP4.31□□□□□ -1.72
YBX3-210ENST00000540975 MNS1Q8NEH6 495 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 SYAP1Q96A49 352 aaPredicted RBP4.31□□□□□ -1.72
YBX3-210ENST00000540975 CXorf58Q96LI9 332 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 SIGLEC12Q96PQ1 595 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 TEX13BQ9BXU2 312 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 SLC26A1Q9H2B4 701 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 TSPY26PQ9H489 355 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 ZNF275Q9NSD4 429 aaPredicted RBP4.31□□□□□ -1.72
YBX3-210ENST00000540975 SPG21Q9NZD8 308 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 SENP1Q9P0U3 644 aa4.31□□□□□ -1.72
YBX3-210ENST00000540975 RABL2AQ9UBK7 228 aaPredicted RBP4.31□□□□□ -1.72
YBX3-210ENST00000540975 CCDC88BA6NC98 1476 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 CCT8L1PA6NM43 557 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 YJEFN3A6XGL0 299 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 C19orf81C9J6K1 198 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 K7ERI5 159 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 PSMD3O43242 534 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 BBOX1O75936 387 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 GOT2P00505 430 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 HOXD10P28358 340 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 OAS2P29728 719 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 MDH2P40926 338 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 ARHGDIAP52565 204 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 SLC12A3P55017 1021 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 KCNK10P57789 538 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 GSG1Q2KHT4 349 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 MTERF4Q7Z6M4 381 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 NKAIN3Q8N8D7 197 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 SIDT2Q8NBJ9 832 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 ZNF671Q8TAW3 534 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 GDAP1Q8TB36 358 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 C17orf50Q8WW18 174 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 TBC1D31Q96DN5 1066 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 TEX13AQ9BXU3 409 aaPredicted RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 DDX28Q9NUL7 540 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 CIDEBQ9UHD4 219 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 XPO7Q9UIA9 1087 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 MRTO4Q9UKD2 239 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 CLEC4EQ9ULY5 219 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 KNSTRNQ9Y448 316 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 DDX49Q9Y6V7 483 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 CFAP65Q6ZU64 1925 aaKnown RBP4.3□□□□□ -1.72
YBX3-210ENST00000540975 MAPKBP1O60336 1514 aa4.3□□□□□ -1.72
YBX3-210ENST00000540975 SMARCA4P51532 1647 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 KIF7Q2M1P5 1343 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 IGHV3OR16-12A0A075B7B8 117 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 KLF18A0A0U1RQI7 1052 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 SLC7A4O43246 635 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 PRAMEF12O95522 483 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 MBL2P11226 248 aaPredicted RBP4.29□□□□□ -1.72
YBX3-210ENST00000540975 PGAM2P15259 253 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 TKTL1P51854 596 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 MFAP2P55001 183 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 MECOMQ03112 1051 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 TRADDQ15628 312 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 ZNF79Q15937 498 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 FUT11Q495W5 492 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 PIWIL3Q7Z3Z3 882 aaKnown RBP4.29□□□□□ -1.72
YBX3-210ENST00000540975 SNX32Q86XE0 403 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 LINC00518Q8N0U6 118 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 N4BP2L2Q92802 583 aaPredicted RBP4.29□□□□□ -1.72
YBX3-210ENST00000540975 RAB3CQ96E17 227 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 CCT8L2Q96SF2 557 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 PAXXQ9BUH6 204 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 PNPLA3Q9NST1 481 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 VNN3Q9NY84 501 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 IL17CQ9P0M4 197 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 NYAP2Q9P242 653 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 WIZO95785 1651 aa4.29□□□□□ -1.72
YBX3-210ENST00000540975 A0A0U1RQK1 487 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 ZNF320A2RRD8 509 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms