RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 NME2P22392 152 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 GRK2P25098 689 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 MPIP34949 423 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 SLC1A6P48664 564 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 WDR4P57081 412 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 GPR85P60893 370 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 RPL38P63173 70 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 MAP4K2Q12851 820 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 ELOAQ14241 798 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 EXOSC7Q15024 291 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 EBPQ15125 230 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 PDCD2Q16342 344 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 MPEG1Q2M385 716 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 TRMT12Q53H54 448 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 XKR7Q5GH72 579 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 HLA-DQA1Q5Y7H0 255 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 OPN5Q6U736 354 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 IKBIPQ70UQ0 350 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 HDXQ7Z353 690 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 GPALPP1Q8IXQ4 340 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 SAMD14Q8IZD0 417 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF781Q8N8C0 355 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF615Q8N8J6 731 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 FAM98AQ8NCA5 519 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 OR7G1Q8NGA0 311 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 OR9A2Q8NGT5 310 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 CLHC1Q8NHS4 586 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 SLC22A8Q8TCC7 542 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 NR4A3Q92570 626 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 ARL8AQ96BM9 186 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 PPP1R36Q96LQ0 422 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 PPP3R2Q96LZ3 170 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 TSSK3Q96PN8 268 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 BBS4Q96RK4 519 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 CCT7Q99832 543 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 C20orf27Q9GZN8 174 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 OR10A5Q9H207 317 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 TIMMDC1Q9NPL8 285 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 MAT2BQ9NZL9 334 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 GIMAP2Q9UG22 337 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 BCAP29Q9UHQ4 241 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 BAIAP2L1Q9UHR4 511 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 EXO1Q9UQ84 846 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 KLF13Q9Y2Y9 288 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 TMED5Q9Y3A6 229 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 RAP2CQ9Y3L5 183 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 FASNP49327 2511 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 G3V3Y1 287 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 AKAP10O43572 662 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 PEX1O43933 1283 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 SNUPNO95149 360 aaKnown RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 LRATO95237 230 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 JUNP05412 331 aaKnown RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 BCKDHAP12694 445 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 H2AFXP16104 143 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 S1PR1P21453 382 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 MST1P26927 711 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 NTSP30990 170 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 RPL14P50914 215 aaKnown RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 NR0B1P51843 470 aaKnown RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 NCBP2P52298 156 aaKnown RBP eCLIP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 MRPS35P82673 323 aaKnown RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 MGAT2Q10469 447 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 BST1Q10588 318 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 NNATQ16517 81 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 PRSS53Q2L4Q9 553 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 EIF2S3LQ2VIR3 472 aaKnown RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 ATP6AP1LQ52LC2 224 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 AGBL2Q5U5Z8 902 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF324BQ6AW86 544 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 ANKRD26P1Q6NSI1 321 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 TMEM64Q6YI46 380 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 RTL4Q6ZR62 310 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 SULF2Q8IWU5 870 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 FAM9CQ8IZT9 166 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 CPSF7Q8N684 471 aaKnown RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 FNDC5Q8NAU1 212 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 ST6GALNAC3Q8NDV1 305 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 PSD4Q8NDX1 1056 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 SIMC1Q8NDZ2 872 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 OR52R1Q8NGF1 315 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 OR5M3Q8NGP4 307 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 DNAJB8Q8NHS0 232 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 C16orf52Q8NHV5 167 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 KAT2AQ92830 837 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 TUBGCP3Q96CW5 907 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 FCRL1Q96LA6 429 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 FRMD6Q96NE9 622 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 SORT1Q99523 831 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 SLX1AQ9BQ83 275 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 C1orf50Q9BV19 199 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 TSPAN10Q9H1Z9 355 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 ANKRA2Q9H9E1 313 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF639Q9UID6 485 aa8.53□□□□□ -1.04
SNHG1-215ENST00000540904 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 WBP11Q9Y2W2 641 aaKnown RBP8.53□□□□□ -1.04
SNHG1-215ENST00000540904 CPAMD8Q8IZJ3 1885 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms