RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SORBS1Q9BX66 1292 aaKnown RBP8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 ZNF717Q9BY31 904 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 CLK4Q9HAZ1 481 aaKnown RBP8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 FARSBQ9NSD9 589 aaKnown RBP8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 OXSMQ9NWU1 459 aa8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 MKS1Q9NXB0 559 aa8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 ANKRD10Q9NXR5 420 aa8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 B4GALT7Q9UBV7 327 aa8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 ADGRE2Q9UHX3 823 aa8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 FOXD3Q9UJU5 478 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 CLDN16Q9Y5I7 305 aa8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
TRAPPC1-202ENST00000540486 IGHV3-20A0A0C4DH32 117 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 A0A0G2JNJ9 132 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 FOXE1O00358 373 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 CYR61O00622 381 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 PLPP1O14494 284 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 SPRY1O43609 319 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 NME2P1O60361 137 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 CDC40O60508 579 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 B4GALT2O60909 372 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 SLC25A12O75746 678 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 CDC123O75794 336 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 OTCP00480 354 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 MYL2P10916 166 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 IL10P22301 178 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 NME2P22392 152 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 ATP5A1P25705 553 aaKnown RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 PTX3P26022 381 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 ACVR2AP27037 513 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 ALDH3A1P30838 453 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 BSGP35613 385 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 ETV4P43268 484 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 HNRNPFP52597 415 aaKnown RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 NAGLUP54802 743 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 MTTPP55157 894 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 FOXA1P55317 472 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 LIM2P55344 173 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 RHAGQ02094 409 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 DDX39BQ13838 428 aaKnown RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 MPP2Q14168 576 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 PCLAFQ15004 111 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 GXYLT1Q4G148 440 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 TMEM35AQ53FP2 167 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 TCHHL1Q5QJ38 904 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 FRG2Q64ET8 278 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 OR4C11Q6IEV9 310 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 NIPAL1Q6NVV3 410 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 TRIM40Q6P9F5 258 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 LRIG3Q6UXM1 1119 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 B3GNT6Q6ZMB0 384 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 LANCL3Q6ZV70 420 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 C10orf107Q8IVU9 208 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 ACOT4Q8N9L9 421 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 TMEM52Q8NDY8 209 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 C16orf52Q8NHV5 167 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 RDH11Q8TC12 318 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 TBC1D20Q96BZ9 403 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 CCDC126Q96EE4 140 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 CMTM7Q96FZ5 175 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 APOPT1Q96IL0 206 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 FAR2Q96K12 515 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 FAM111AQ96PZ2 611 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 FRG2BQ96QU4 278 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 OR1F2PQ96R84 312 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 SERINC2Q96SA4 455 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 TBCDQ9BTW9 1192 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 GATA5Q9BWX5 397 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 NPLQ9BXD5 320 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 KCNK13Q9HB14 408 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 TNFRSF12AQ9NP84 129 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 Q9UFV3 132 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 DAPP1Q9UN19 280 aa8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 PHF3Q92576 2039 aaKnown RBP8.19□□□□□ -1.1
TRAPPC1-202ENST00000540486 TUBAL3A6NHL2 446 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 WASHC1A8K0Z3 465 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 GABRR3A8MPY1 467 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 KLRC4-KLRK1H3BQV0 150 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 TGFBR3LH3BV60 316 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 RGS16O15492 202 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 B3GALT2O43825 422 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 HS6ST1O60243 411 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 TRIM13O60858 407 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 SCELO95171 688 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 PDYNP01213 254 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 FHP07954 510 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 C8orf89P0DMQ9 161 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 GLI4P10075 376 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CHN1P15882 459 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 HIST1H1TP22492 207 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CERS1P27544 350 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 SERPINB1P30740 379 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 ARL1P40616 181 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 SLAMF1Q13291 335 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CUL3Q13618 768 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 BTBD16Q32M84 506 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 MINDY4Q4G0A6 757 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CMPK2Q5EBM0 449 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms