RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ATP6V1C2Q8NEY4 427 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 TBC1D15Q8TC07 691 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 HCAR2Q8TDS4 363 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF431Q8TF32 576 aaPredicted RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 RIPOR3Q96MK2 946 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 FAM83CQ9BQN1 747 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 SMURF1Q9HCE7 757 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CALML5Q9NZT1 146 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 EXTL2Q9UBQ6 330 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 GPR52Q9Y2T5 361 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CLCA1A8K7I4 914 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 SLC16A5O15375 505 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 LINC01565O15544 149 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ALPLP05186 524 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CSN2P05814 226 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 FHP07954 510 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 MRPL3P09001 348 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 POU2F2P09086 479 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 AHCYP23526 432 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CMPK1P30085 196 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 TIA1P31483 386 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ID2Q02363 134 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF267Q14586 743 aaPredicted RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 ITPRIPL2Q3MIP1 535 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 C2orf27AQ580R0 203 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 HMBOX1Q6NT76 420 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 LILRA3Q8N6C8 439 aaPredicted RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 IQCF1Q8N6M8 205 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 PAPD5Q8NDF8 572 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 VN1R2Q8NFZ6 395 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 GTF2H4Q92759 462 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 AHCYL2Q96HN2 611 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 CAMK1GQ96NX5 476 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 SECISBP2Q96T21 854 aaKnown RBP9.5□□□□□ -0.89
TRAF1-202ENST00000540010 TCF7L1Q9HCS4 588 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 RDH8Q9NYR8 311 aa9.5□□□□□ -0.89
TRAF1-202ENST00000540010 MCIDASD6RGH6 385 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 CTDSP2O14595 271 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 OR2B3O76000 313 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 TACR1P25103 407 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF81P51508 661 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 SNAP47Q5SQN1 464 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 RPTNQ6XPR3 784 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 TECPR1Q7Z6L1 1165 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 HDDC3Q8N4P3 179 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF248Q8NDW4 579 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 FOXJ1Q92949 421 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 PIP5K1AQ99755 562 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 FUZQ9BT04 418 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 XKR8Q9H6D3 395 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 NUFIP1Q9UHK0 495 aaKnown RBP9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ABCG2Q9UNQ0 655 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ERVK-11Q9UQG0 969 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 IFNA6P05013 189 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 RETP07949 1114 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 JUPP14923 745 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 SDC1P18827 310 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ADAM15Q13444 863 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 CDKL4Q5MAI5 379 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 GTF2IRD2BQ6EKJ0 949 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 GTF2IRD2Q86UP8 949 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 CHFRQ96EP1 664 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF514Q96K75 400 aaPredicted RBP9.49□□□□□ -0.89
TRAF1-202ENST00000540010 F2RL3Q96RI0 385 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 NTMT1Q9BV86 223 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 CLDND1Q9NY35 253 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 COQ3Q9NZJ6 369 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 PRELID1Q9Y255 219 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 MRPS33Q9Y291 106 aaKnown RBP9.49□□□□□ -0.89
TRAF1-202ENST00000540010 OBSL1O75147 1896 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 TSPAN11A1L157 253 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ANXA2P2A6NMY6 339 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ANXA2P07355 339 aaKnown RBP9.49□□□□□ -0.89
TRAF1-202ENST00000540010 PIK3CBP42338 1070 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 SLC9A3P48764 834 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 PGDP52209 483 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ST3GAL3Q11203 375 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 LIPJQ5W064 366 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 JAZF1Q86VZ6 243 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 MEX3DQ86XN8 651 aaKnown RBP9.49□□□□□ -0.89
TRAF1-202ENST00000540010 OR8J1Q8NGP2 316 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 OR9A1PQ8NGU1 263 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 UBTD2Q8WUN7 234 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 ABCG5Q9H222 651 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 MMP28Q9H239 520 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 OR51I1Q9H343 314 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 DPEP2Q9H4A9 486 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 NANSQ9NR45 359 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 MGAT4BQ9UQ53 548 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 FKBP7Q9Y680 259 aa9.49□□□□□ -0.89
TRAF1-202ENST00000540010 E7EQ34 232 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 K7ESM1 405 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PROM1O43490 865 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 GSTM3P21266 225 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ALAS2P22557 587 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PDHA2P29803 388 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 SOX9P48436 509 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 OR12D2P58182 307 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 MC1RQ01726 317 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms