RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 KIAA1549Q9HCM3 1950 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 SAP18O00422 153 aaKnown RBP13.8□□□□□ -0.2
USB1-203ENST00000539737 PLPP1O14494 284 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 PROM1O43490 865 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 TYROBPO43914 113 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 TRIM13O60858 407 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 SH3BGRLO75368 114 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 CTAG2O75638 210 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 IFNA16P05015 189 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 HSD3B1P14060 373 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 DRD2P14416 443 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 HSD3B2P26439 372 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 MAGEA5P43359 124 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 DNASE1L1P49184 302 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 NEK2P51955 445 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 LIM2P55344 173 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 STX4Q12846 297 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 CSTF3Q12996 717 aaKnown RBP13.8□□□□□ -0.2
USB1-203ENST00000539737 TNFAIP8L3Q5GJ75 292 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 ZNF793Q6ZN11 406 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 WDR53Q7Z5U6 358 aaPredicted RBP13.8□□□□□ -0.2
USB1-203ENST00000539737 HOMEZQ8IX15 550 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 EID3Q8N140 333 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 TMEM132CQ8N3T6 1108 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 ZCCHC7Q8N3Z6 543 aaKnown RBP13.8□□□□□ -0.2
USB1-203ENST00000539737 RNF175Q8N4F7 328 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 ACOT4Q8N9L9 421 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 B3GNT7Q8NFL0 401 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 METTL6Q8TCB7 284 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 DOK4Q8TEW6 326 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 VMP1Q96GC9 406 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 CSF3RQ99062 836 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 FOXC2Q99958 501 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 TTYH2Q9BSA4 534 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 MID1IP1Q9NPA3 183 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 DLL4Q9NR61 685 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 NMRK1Q9NWW6 199 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 AHSPQ9NZD4 102 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 PHF11Q9UIL8 331 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 ST6GALNAC2Q9UJ37 374 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 ZNF225Q9UK10 706 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 CLCA3PQ9Y6N3 262 aa13.8□□□□□ -0.2
USB1-203ENST00000539737 NSD1Q96L73 2696 aaPredicted RBP13.8□□□□□ -0.2
USB1-203ENST00000539737 MPDZO75970 2070 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 ATP6AP2A0A1C7CYW4 349 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 RTCAO00442 366 aaKnown RBP13.79□□□□□ -0.2
USB1-203ENST00000539737 MANBAO00462 879 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 TM9SF1O15321 606 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 CRCPO75575 148 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 ATP6AP2O75787 350 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 LRATO95237 230 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 PDYNP01213 254 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 ACVR2AP27037 513 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 SSR4P51571 173 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 GPR143P51810 404 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 CASP8Q14790 479 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 SGO1Q5FBB7 561 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 PAGE2Q7Z2X7 111 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 EXOC3L1Q86VI1 746 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 TMEM251Q8N6I4 163 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 WFDC11Q8NEX6 87 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 DAZLQ92904 295 aaKnown RBP13.79□□□□□ -0.2
USB1-203ENST00000539737 ADAP2Q9NPF8 381 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 LYARQ9NX58 379 aaKnown RBP13.79□□□□□ -0.2
USB1-203ENST00000539737 MS4A12Q9NXJ0 267 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 CRIM1Q9NZV1 1036 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 SPRR3Q9UBC9 169 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 ADAM29Q9UKF5 820 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 SLC12A4Q9UP95 1085 aa13.79□□□□□ -0.2
USB1-203ENST00000539737 RPH3AQ9Y2J0 694 aaPredicted RBP13.79□□□□□ -0.2
USB1-203ENST00000539737 A8MVJ9 347 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 DYRK3O43781 588 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 ULK1O75385 1050 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 ZFAND5O76080 213 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 ETHE1O95571 254 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 COX7A2P14406 83 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 CREB1P16220 341 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 TNNI3P19429 210 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 ENDOUP21128 410 aaKnown RBP13.78□□□□□ -0.2
USB1-203ENST00000539737 ALDH3A1P30838 453 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 SERPINB5P36952 375 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 ADAM8P78325 824 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 ID2Q02363 134 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 FOLH1Q04609 750 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 SERTAD2Q14140 314 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 CYP20A1Q6UW02 462 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 ARSKQ6UWY0 536 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 SCUBE1Q8IWY4 988 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 ARMC10Q8N2F6 343 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 GBP7Q8N8V2 638 aaPredicted RBP13.78□□□□□ -0.2
USB1-203ENST00000539737 GATA5Q9BWX5 397 aaPredicted RBP13.78□□□□□ -0.2
USB1-203ENST00000539737 SORBS1Q9BX66 1292 aaKnown RBP13.78□□□□□ -0.2
USB1-203ENST00000539737 ZNF717Q9BY31 904 aaPredicted RBP13.78□□□□□ -0.2
USB1-203ENST00000539737 CLEC4MQ9H2X3 399 aaPredicted RBP13.78□□□□□ -0.2
USB1-203ENST00000539737 DDX31Q9H8H2 851 aaKnown RBP13.78□□□□□ -0.2
USB1-203ENST00000539737 TIMMDC1Q9NPL8 285 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 HPF1Q9NWY4 346 aa13.78□□□□□ -0.2
USB1-203ENST00000539737 TUBA8Q9NY65 449 aaPredicted RBP13.78□□□□□ -0.2
USB1-203ENST00000539737 A0A0A6YYD5 115 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms