RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SNX25Q9H3E2 840 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF160Q9HCG1 818 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MAN2C1Q9NTJ4 1040 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 SERTAD4Q9NUC0 356 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ACOXLQ9NUZ1 547 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 DLL3Q9NYJ7 618 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MIS18AQ9NYP9 233 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 EMC3Q9P0I2 261 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 GCNT4Q9P109 453 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ERVK-18Q9QC07 812 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CTSFQ9UBX1 484 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 NARFQ9UHQ1 456 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 NOCTQ9UK39 431 aaKnown RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 FBXO4Q9UKT5 387 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PIGLQ9Y2B2 252 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CREBBPQ92793 2442 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PCNX1Q96RV3 2341 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PRRC2BQ5JSZ5 2229 aaKnown RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ATMQ13315 3056 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 FLNCQ14315 2725 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TMEM200CA6NKL6 621 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 EIF4E1BA6NMX2 242 aaKnown RBP3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 MARCH11A6NNE9 402 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 C12orf71A8MTZ7 269 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 MS4A18H0YCH9 400 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ABCD4O14678 606 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SLC22A2O15244 555 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 XRCC3O43542 346 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 PLPP2O43688 288 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SULT1B1O43704 296 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 DFNA5O60443 496 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ACSL4O60488 711 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 UPK3AO75631 287 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 CABYRO75952 493 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 CBSLP0DN79 551 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 HKR1P10072 659 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 GNSP15586 552 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 CD58P19256 250 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 CYP3A5P20815 502 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TUBG1P23258 451 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 AXLP30530 894 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 CBSP35520 551 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 FDFT1P37268 417 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 NAMPTP43490 491 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 RPS5P46782 204 aaKnown RBP3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SLC6A8P48029 635 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SLC9A3P48764 834 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 CLCN5P51795 746 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 NAPAP54920 295 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SEC61GP60059 68 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TUBA1BP68363 451 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 FGL1Q08830 312 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 MERTKQ12866 999 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 MSLNQ13421 630 aaPredicted RBP3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 KPNB1Q14974 876 aaKnown RBP3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TRIP10Q15642 601 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 C2orf68Q2NKX9 166 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TEX44Q53QW1 395 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ESCO2Q56NI9 601 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 XKR7Q5GH72 579 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 NKAIN2Q5VXU1 208 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SIGIRRQ6IA17 410 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 PYHIN1Q6K0P9 492 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ZSCAN25Q6NSZ9 544 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TTC27Q6P3X3 843 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TTC23LQ6PF05 361 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 BLOC1S2Q6QNY1 142 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF704Q6ZNC4 412 aaPredicted RBP3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TUBA1AQ71U36 451 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 C16orf62Q7Z3J2 963 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 GPR142Q7Z601 462 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TRIM74Q86UV6 250 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TRIM73Q86UV7 250 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 AMIGO1Q86WK6 493 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 FAM58AQ8N1B3 248 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 THEM5Q8N1Q8 247 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 PAQR4Q8N4S7 273 aaPredicted RBP3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 C7orf57Q8NEG2 295 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ENGASEQ8NFI3 743 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 OR52N4Q8NGI2 321 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 OR6S1Q8NH40 331 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 RAET1EQ8TD07 263 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 GIPC3Q8TF64 312 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 RAB1CQ92928 201 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 KAZALD1Q96I82 304 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 PRMT6Q96LA8 375 aaPredicted RBP3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 CASD1Q96PB1 797 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SLC22A12Q96S37 553 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF347Q96SE7 839 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 CBWD1Q9BRT8 395 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 C16orf70Q9BSU1 422 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 KRTAP1-5Q9BYS1 174 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ANKRD60Q9BZ19 345 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 IL22Q9GZX6 179 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ZMYND12Q9H0C1 365 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 OR52A5Q9H2C5 316 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 DPAGT1Q9H3H5 408 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 DPEP3Q9H4B8 488 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 LRRC19Q9H756 370 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms