RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 GPR155Q7Z3F1 870 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 ZNF615Q8N8J6 731 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 TMEM102Q8N9M5 508 aaPredicted RBP12.09□□□□□ -0.47
CCDC42-202ENST00000539522 B3GNT7Q8NFL0 401 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 OR9A2Q8NGT5 310 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 M1APQ8TC57 530 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 SLC2A12Q8TD20 617 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 NCLNQ969V3 563 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 SLC7A6OSQ96CW6 309 aaPredicted RBP12.09□□□□□ -0.47
CCDC42-202ENST00000539522 MTERF3Q96E29 417 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 SENP5Q96HI0 755 aaPredicted RBP12.09□□□□□ -0.47
CCDC42-202ENST00000539522 DGAT2Q96PD7 388 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 LPAR4Q99677 370 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 SLC25A23Q9BV35 468 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 C1orf21Q9H246 121 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 CLMPQ9H6B4 373 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 ZNF552Q9H707 407 aaPredicted RBP12.09□□□□□ -0.47
CCDC42-202ENST00000539522 MMP25Q9NPA2 562 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 SIRT3Q9NTG7 399 aaPredicted RBP12.09□□□□□ -0.47
CCDC42-202ENST00000539522 CCDC167Q9P0B6 97 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 C19orf25Q9UFG5 118 aaPredicted RBP12.09□□□□□ -0.47
CCDC42-202ENST00000539522 DTX4Q9Y2E6 619 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 EXPH5Q8NEV8 1989 aa12.09□□□□□ -0.47
CCDC42-202ENST00000539522 PIEZO2Q9H5I5 2752 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 FAM234BA2RU67 622 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 ASPDHA6ND91 283 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 A6NL46 340 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 PEX12O00623 359 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 GYG2O15488 501 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 DNAJC8O75937 253 aaPredicted RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 IFNA16P05015 189 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 ITGB2P05107 769 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 SERPINA7P05543 415 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 CSNK2A2P19784 350 aaPredicted RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 PRPS1L1P21108 318 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 SOX11P35716 441 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 CDK9P50750 372 aaKnown RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 DGKQP52824 942 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 POLE2P56282 527 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 SLC37A1P57057 533 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 MAP4K2Q12851 820 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 AIMP2Q13155 320 aaKnown RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 EXOSC7Q15024 291 aaKnown RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 BTBD16Q32M84 506 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 SPANXN4Q5MJ08 99 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 BORAQ6PGQ7 559 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 BLOC1S3Q6QNY0 202 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 ASRGL1Q7L266 308 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 SNX32Q86XE0 403 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 C9orf40Q8IXQ3 194 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 ARMC10Q8N2F6 343 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 LRRC25Q8N386 305 aaPredicted RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 GALNT16Q8N428 558 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 POU5F2Q8N7G0 328 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 GLB1L3Q8NCI6 653 aaPredicted RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 OR7G2Q8NG99 324 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 OR1N1Q8NGS0 311 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 OR14A16Q8NHC5 309 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 ZNF675Q8TD23 568 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 BRIX1Q8TDN6 353 aaKnown RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 APOBEC4Q8WW27 367 aaKnown RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 KAT2AQ92830 837 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 RIT1Q92963 219 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 TESCQ96BS2 214 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 FBXL20Q96IG2 436 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 THOC3Q96J01 351 aaKnown RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 ZBTB18Q99592 522 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 LRMDAQ9H2I8 198 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 LIN28AQ9H9Z2 209 aaKnown RBP12.08□□□□□ -0.48
CCDC42-202ENST00000539522 TAS2R1Q9NYW7 299 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 MAPRE3Q9UPY8 281 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 ERVK-19Q9WJR5 959 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 NDUFAF1Q9Y375 327 aa12.08□□□□□ -0.48
CCDC42-202ENST00000539522 KALRNO60229 2985 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 CFAP73A6NFT4 308 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 PSMG1O95456 288 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 KRT16P08779 473 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 FAM87AP0C7U9 286 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 CD97P48960 835 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 CCL11P51671 97 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 PGDP52209 483 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 POLR2JP52435 117 aaKnown RBP12.07□□□□□ -0.48
CCDC42-202ENST00000539522 KCNK10P57789 538 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 MXRA7P84157 204 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 PLIN5Q00G26 463 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 ART3Q13508 389 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 ZNF267Q14586 743 aaPredicted RBP12.07□□□□□ -0.48
CCDC42-202ENST00000539522 FCRLBQ6BAA4 426 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 OR4F3Q6IEY1 312 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 RINLQ6ZS11 566 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 CLECL1Q8IZS7 167 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 SIRT6Q8N6T7 355 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 MORN4Q8NDC4 146 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 OR8J2Q8NGG1 315 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 PPCDCQ96CD2 204 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 DPY30Q9C005 99 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 OR8D2Q9GZM6 311 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 ATP13A2Q9NQ11 1180 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms