RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CELF6Q96J87 481 aaKnown RBP6.36□□□□□ -1.39
USP28-207ENST00000538475 RHOVQ96L33 236 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 COQ10AQ96MF6 247 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 HSPA12BQ96MM6 686 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 CMTM3Q96MX0 182 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 FOPNLQ96NB1 174 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 FAM193BQ96PV7 902 aaPredicted RBP6.36□□□□□ -1.39
USP28-207ENST00000538475 SLC38A2Q96QD8 506 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 TEFMQ96QE5 360 aaKnown RBP6.36□□□□□ -1.39
USP28-207ENST00000538475 NELL2Q99435 816 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 GPR21Q99679 349 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 PIP5K1AQ99755 562 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 H2AFJQ9BTM1 129 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 KATNB1Q9BVA0 655 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 DPCDQ9BVM2 203 aaPredicted RBP6.36□□□□□ -1.39
USP28-207ENST00000538475 SPATA5L1Q9BVQ7 753 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 FAM126AQ9BYI3 521 aaPredicted RBP6.36□□□□□ -1.39
USP28-207ENST00000538475 POLR1EQ9GZS1 481 aaKnown RBP6.36□□□□□ -1.39
USP28-207ENST00000538475 RNF32Q9H0A6 362 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 ELOVL6Q9H5J4 265 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 ZNF408Q9H9D4 720 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 BIN3Q9NQY0 253 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 ABCC13Q9NSE7 274 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 TMEM248Q9NWD8 314 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 NDUFAF4Q9P032 175 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 AKAP7Q9P0M2 348 aaPredicted RBP6.36□□□□□ -1.39
USP28-207ENST00000538475 COPS3Q9UNS2 423 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 MED16Q9Y2X0 877 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 OARD1Q9Y530 152 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 CACNG2Q9Y698 323 aa6.36□□□□□ -1.39
USP28-207ENST00000538475 SYNJ2BP-COX16A0A087WUM0 186 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 PRAMEF33A0A0G2JMD5 474 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 FAM221AA4D161 298 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 NAP1L6A6NFF2 107 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 C2orf81A6NN90 581 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 HMSDA8MTL9 139 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 E9PAM4 449 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 H3BS24 57 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 H7C2Y5 167 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 FZD9O00144 591 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 TLR4O00206 839 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CBX4O00257 560 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 FPGTO14772 594 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 FFAR2O15552 330 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 UGDHO60701 494 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 PRAMEF10O60809 474 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 SCO1O75880 301 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 AQP8O94778 261 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 RGS11O94810 467 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 OR5F1O95221 314 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CLDN9O95484 217 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 NFATC1O95644 943 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 OLFM2O95897 454 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 RNASE1P07998 156 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 IQCF3P0C7M6 154 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 ZNF865P0CJ78 1059 aaPredicted RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 OSMP13725 252 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 HSD3B1P14060 373 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 DARSP14868 501 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 ENGP17813 658 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 AHCYP23526 432 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 LMO2P25791 158 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 HSD3B2P26439 372 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 APEX1P27695 318 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 PRKAR1BP31321 381 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 RPL3P39023 403 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 CD86P42081 329 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 XCR1P46094 333 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 BDKRB1P46663 353 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 HTR6P50406 440 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 RAB13P51153 203 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 PSMD4P55036 377 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 RAP2BP61225 183 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 RPS7P62081 194 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 PITPNAQ00169 270 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 BDH1Q02338 343 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 FGL1Q08830 312 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 RAB40BQ12829 278 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 SP140Q13342 867 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 BTN1A1Q13410 526 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 SERINC3Q13530 473 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 DYRK1AQ13627 763 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 IL18Q14116 193 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 GPR176Q14439 515 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 KRT33BQ14525 404 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 TMEM132BQ14DG7 1078 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 SNAPC1Q16533 368 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CRB2Q5IJ48 1285 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 FAM69AQ5T7M9 428 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 LYPLAL1Q5VWZ2 237 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 NADSYN1Q6IA69 706 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 PYHIN1Q6K0P9 492 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 LIN54Q6MZP7 749 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 NOTUMQ6P988 496 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 SLC23A3Q6PIS1 610 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CASP12Q6UXS9 341 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 C22orf34Q6ZV56 151 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 BTN2A1Q7KYR7 527 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 TPRA1Q86W33 373 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CCDC36Q8IYA8 594 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 476.4 ms