RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PSMG1O95456 288 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 PRPS2P11908 318 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 TNNI3P19429 210 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 CSNK2A2P19784 350 aaPredicted RBP12.13□□□□□ -0.47
CHFR-216ENST00000538235 GPX3P22352 226 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 GALNSP34059 522 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 MDH1P40925 334 aaKnown RBP12.13□□□□□ -0.47
CHFR-216ENST00000538235 EMDP50402 254 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 CLCN2P51788 898 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 AQP5P55064 265 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 CLDN8P56748 225 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 MAP4K2Q12851 820 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 NFATC3Q12968 1075 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 NNATQ16517 81 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 SMU1Q2TAY7 513 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 CRB2Q5IJ48 1285 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 JMJD6Q6NYC1 403 aaPredicted RBP12.13□□□□□ -0.47
CHFR-216ENST00000538235 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 ISLR2Q6UXK2 745 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 NPSR1Q6W5P4 371 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 TMEM64Q6YI46 380 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 WDR53Q7Z5U6 358 aaPredicted RBP12.13□□□□□ -0.47
CHFR-216ENST00000538235 LRRC34Q8IZ02 419 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 CLECL1Q8IZS7 167 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 VWA5B2Q8N398 1253 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 C16orf52Q8NHV5 167 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 ACTRT2Q8TDY3 377 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 DAZLQ92904 295 aaKnown RBP12.13□□□□□ -0.47
CHFR-216ENST00000538235 ADIPOR1Q96A54 375 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 ITPAQ9BY32 194 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 WWTR1Q9GZV5 400 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 ZNF385DQ9H6B1 395 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 MIEF1Q9NQG6 463 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 NOP53Q9NZM5 478 aaKnown RBP12.13□□□□□ -0.47
CHFR-216ENST00000538235 NTNG1Q9Y2I2 539 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 HRH3Q9Y5N1 445 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 FREM3P0C091 2139 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 ZNF462Q96JM2 2506 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 NINQ8N4C6 2090 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 A0A0G2JMM0 328 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 A0A1W2PPB8 328 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 A0A1W2PRS3 328 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 KIR3DP1A8MWS1 328 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 E9PBE3 544 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 PDPK1O15530 556 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 KLHL41O60662 606 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 NEURL1O76050 574 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 SORBS2O94875 1100 aaKnown RBP12.12□□□□□ -0.47
CHFR-216ENST00000538235 NCBP2P52298 156 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHFR-216ENST00000538235 HSPB3Q12988 150 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 TUBA3CQ13748 450 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 SPANXN4Q5MJ08 99 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 AGAP7PQ5VUJ5 663 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 OR4F3Q6IEY1 312 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 TUBA3EQ6PEY2 450 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 TMEM107Q6UX40 140 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 Q6ZS92 163 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 CAMKMTQ7Z624 323 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 RPS19BP1Q86WX3 136 aaKnown RBP12.12□□□□□ -0.47
CHFR-216ENST00000538235 OR52R1Q8NGF1 315 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 PPCDCQ96CD2 204 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 COQ8BQ96D53 544 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 GIMAP5Q96F15 307 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 RBM18Q96H35 190 aaKnown RBP12.12□□□□□ -0.47
CHFR-216ENST00000538235 AGAP4Q96P64 663 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 RASL10BQ96S79 203 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 PELOQ9BRX2 385 aaKnown RBP12.12□□□□□ -0.47
CHFR-216ENST00000538235 NPHS2Q9NP85 383 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 MAP10Q9P2G4 905 aa12.12□□□□□ -0.47
CHFR-216ENST00000538235 ASPDHA6ND91 283 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 TRPC5OSA6NMA1 111 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 UPK1AO00322 258 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 ITGA10O75578 1167 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 OR2J2O76002 312 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 OR6B1O95007 311 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 CD96P40200 585 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 SOX3P41225 446 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 ASMTP46597 345 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 DGKQP52824 942 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 CORO7P57737 925 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 PLEKHN1Q494U1 663 aaPredicted RBP12.11□□□□□ -0.47
CHFR-216ENST00000538235 HSP90B2PQ58FF3 399 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 EXOSC6Q5RKV6 272 aaKnown RBP12.11□□□□□ -0.47
CHFR-216ENST00000538235 HSDL2Q6YN16 418 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 RNF111Q6ZNA4 994 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 FUNDC1Q8IVP5 155 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 FAM9CQ8IZT9 166 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 CLEC4FQ8N1N0 589 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 VPS50Q96JG6 964 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 GAL3ST4Q96RP7 486 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 DEFB126Q9BYW3 111 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 NXF5Q9H1B4 397 aaKnown RBP12.11□□□□□ -0.47
CHFR-216ENST00000538235 OR10A5Q9H207 317 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 SERHL2Q9H4I8 314 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 CLMPQ9H6B4 373 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 CXorf36Q9H7Y0 433 aa12.11□□□□□ -0.47
CHFR-216ENST00000538235 PFDN4Q9NQP4 134 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms