RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 OR12D1P0DN82 309 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CKMT1AP12532 417 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TIA1P31483 386 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 ELOCQ15369 112 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 NTRK2Q16620 822 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 FAM205BPQ63HN1 556 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 ASPGQ86U10 573 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 LGALS12Q96DT0 336 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 BORCS6Q96GS4 357 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 MAELQ96JY0 434 aaKnown RBP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 SIGLEC10Q96LC7 697 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 ACSL6Q9UKU0 697 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 SARDHQ9UL12 918 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 SMCHD1A6NHR9 2005 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 ANKRD28O15084 1053 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TOXO94900 526 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 OXSR1O95747 527 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CLIC3O95833 236 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CHMP24386 653 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 RORAP35398 523 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 ALDH3B2P48448 385 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 KCNC1P48547 511 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CAMLGP49069 296 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 DIO3P55073 304 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 MLLT10P55197 1068 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CASP6P55212 293 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 PLCXD2Q0VAA5 305 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 MS4A13Q5J8X5 152 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TMEM236Q5W0B7 351 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TXNRD3NBQ6F5E7 133 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CPNE8Q86YQ8 564 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 NUP43Q8NFH3 380 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TOR1AIP2Q8NFQ8 470 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 GLYATL2Q8WU03 294 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF516Q92618 1163 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 OR2M4Q96R27 311 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TRIB3Q96RU7 358 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 NPY6RQ99463 290 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 HINT2Q9BX68 163 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 ADAMTS10Q9H324 1103 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 FAM86C1Q9NVL1 165 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 PPP4R1LQ9P1A2 415 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 BPTFQ12830 3046 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 HHLA1C9JL84 531 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 ARVCFO00192 962 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 FMO6PO60774 539 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 RNH1P13489 461 aaKnown RBP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 KCNE1P15382 129 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CDK2P24941 298 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 MAGEA11P43364 429 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 POU3F4P49335 361 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 UGT3A2Q3SY77 523 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CNKSR3Q6P9H4 555 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TEX26Q8N6G2 289 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 Q8N9G6 341 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 RAB7BQ96AH8 199 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 GIMAP5Q96F15 307 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 C12orf42Q96LP6 360 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TWNKQ96RR1 684 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 SLC6A16Q9GZN6 736 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 SRA1Q9HD15 236 aaKnown RBP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 RXFP3Q9NSD7 469 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CCM2LQ9NUG4 571 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 PCDHGA8Q9Y5G5 932 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 C1orf226A1L170 272 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 CA12O43570 354 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 NDUFV2P19404 249 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 LEPRP48357 1165 aaKnown RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 RAB4BP61018 213 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ZFAND4Q86XD8 727 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 WDSUB1Q8N9V3 476 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ZSCAN1Q8NBB4 408 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 RCBTB1Q8NDN9 531 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF461Q8TAF7 563 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 MEPEQ9NQ76 525 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 C19orf12Q9NSK7 152 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 LY75O60449 1722 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 FTCDNL1E5RQL4 147 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 SCO2O43819 266 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 SNAP29O95721 258 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 SLC16A8O95907 504 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 RHCEP18577 417 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 FASLGP48023 281 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ART1P52961 327 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 VSX2P58304 361 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 PSPHP78330 225 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 SLC25A11Q02978 314 aaKnown RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 PPA1Q15181 289 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF529Q6P280 563 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 NCCRP1Q6ZVX7 275 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 SCML4Q8N228 414 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 GOLM1Q8NBJ4 401 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 LRIG1Q96JA1 1093 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 OR1F2PQ96R84 312 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 P2RY13Q9BPV8 354 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 BCO2Q9BYV7 579 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 GIMAP2Q9UG22 337 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 POU2F3Q9UKI9 436 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 PLAGL1Q9UM63 463 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms