RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ATXN7L2Q5T6C5 722 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 KIAA1614Q5VZ46 1190 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 C18orf63Q68DL7 685 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RAET1GQ6H3X3 334 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 OR5M10Q6IEU7 315 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 FUT10Q6P4F1 479 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RANBP10Q6VN20 620 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 GDPD4Q6W3E5 623 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZNF551Q7Z340 670 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 RNF130Q86XS8 419 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ADHFE1Q8IWW8 467 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 FAM126BQ8IXS8 530 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PTGR2Q8N8N7 351 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 NIPA2Q8N8Q9 360 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PCSK9Q8NBP7 692 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 UXS1Q8NBZ7 420 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SETD9Q8NE22 299 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 Q8NFD4 153 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 IL31RAQ8NI17 732 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PROKR1Q8TCW9 393 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ING5Q8WYH8 240 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KCNJ9Q92806 393 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ISG20Q96AZ6 181 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 THOC3Q96J01 351 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 TPD52L3Q96J77 140 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 BBS4Q96RK4 519 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CDX2Q99626 313 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 GPR22Q99680 433 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 DPYSL5Q9BPU6 564 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 MRPL57Q9BQC6 102 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 SPRTNQ9H040 489 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 C12orf49Q9H741 205 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 C8orf33Q9H7E9 229 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 TDP1Q9NUW8 608 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TAS2R3Q9NYW6 316 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KLHL8Q9P2G9 620 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 NFKBIL1Q9UBC1 381 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 SPASTQ9UBP0 616 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CHRNA9Q9UGM1 479 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 NDRG3Q9UGV2 375 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TBX21Q9UL17 535 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 FZD4Q9ULV1 537 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 STUB1Q9UNE7 303 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CRYL1Q9Y2S2 319 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SAMHD1Q9Y3Z3 626 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 PLEKHM1Q9Y4G2 1056 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KMT2EQ8IZD2 1858 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 MYO10Q9HD67 2058 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CDH23Q9H251 3354 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 GLYATL1P3A0A0U1RQE8 302 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SHISA3A0PJX4 238 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ZNF729A6NN14 1252 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 D6RAR5 112 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 hCG_1984214I3L0E3 225 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 L7N2F9 121 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 HCRTO43612 131 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PRICKLE3O43900 615 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 SDC3O75056 442 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SLC43A1O75387 559 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 YIF1AO95070 293 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 C22orf31O95567 290 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 LALBAP00709 142 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MT-ND4P03905 459 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CLTBP09497 229 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CD3GP09693 182 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ITGAMP11215 1152 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 G6PDP11413 515 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 HLA-DPA1P20036 260 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 GPD1P21695 349 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CSF2RBP32927 897 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 STARP49675 285 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ARSDP51689 593 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CLDN8P56748 225 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ZNF33AQ06730 810 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 BCL2L1Q07817 233 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PDZK1IP1Q13113 114 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CAMK2GQ13555 558 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 SMCO1Q147U7 214 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 TBCEQ15813 527 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 C18orf21Q32NC0 220 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 TECRLQ5HYJ1 363 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 NCBP2-AS2Q69YL0 99 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 LRRN1Q6UXK5 716 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 C15orf39Q6ZRI6 1047 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SHFQ7M4L6 423 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SLC29A4Q7RTT9 530 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 LRP11Q86VZ4 500 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 FAM131BQ86XD5 332 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MIB1Q86YT6 1006 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 DCUN1D3Q8IWE4 304 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 KRTCAP2Q8N6L1 136 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 DUSP18Q8NEJ0 188 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 BLOC1S5Q8TDH9 187 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 BTN2A2Q8WVV5 523 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SLAMF9Q96A28 289 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ULK4Q96C45 1275 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 RTP4Q96DX8 246 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 FAM122AQ96E09 287 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CCDC17Q96LX7 622 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 HS6ST2Q96MM7 605 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms