RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 RNPEPL1Q9HAU8 725 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 IMPAD1Q9NX62 359 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 CWC25Q9NXE8 425 aaPredicted RBP3.66□□□□□ -1.82
PRKDC-205ENST00000535375 GPRASP1Q5JY77 1395 aa3.65□□□□□ -1.82
PRKDC-205ENST00000535375 SH3PXD2BA1X283 911 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 CCT8L1PA6NM43 557 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 FAM220BPB1ANY3 271 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 GPAA1O43292 621 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 TSPAN2O60636 221 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 GMNNO75496 209 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 OLFM2O95897 454 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 NUDT17P0C025 328 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 UROSP10746 265 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 PRKAR2BP31323 418 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 SLC12A3P55017 1021 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 ERVPABLB-1P60509 514 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 PAX2Q02962 417 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 RCN2Q14257 317 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 STX1AQ16623 288 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 ACER2Q5QJU3 275 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 TMEM270Q6UE05 265 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 C2orf66Q6UXQ4 117 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 OR6M1Q8NGM8 313 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 SNX21Q969T3 373 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 CFAP36Q96G28 342 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 CCT8L2Q96SF2 557 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 PAXXQ9BUH6 204 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 VNN3Q9NY84 501 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 RAI14Q9P0K7 980 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 IL17CQ9P0M4 197 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 AFF2P51816 1311 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 RALGAPA1Q6GYQ0 2036 aa3.65□□□□□ -1.83
PRKDC-205ENST00000535375 IGHV3OR16-12A0A075B7B8 117 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 A0A1W2PRV1 198 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 BICDL2A1A5D9 508 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 YJEFN3A6XGL0 299 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 DDX39AO00148 427 aaKnown RBP3.64□□□□□ -1.83
PRKDC-205ENST00000535375 TSC22D2O75157 780 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 PNPP00491 289 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 MT-ND3P03897 115 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 SBK2P0C263 348 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 B4GALT1P15291 398 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 VCLP18206 1134 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 TNFRSF4P43489 277 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 KIAA1024LP59773 190 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 AP1B1Q10567 949 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 SLC10A1Q14973 349 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 STXBP2Q15833 593 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 PKN2Q16513 984 aaKnown RBP3.64□□□□□ -1.83
PRKDC-205ENST00000535375 MPPE1Q53F39 396 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 KCTD11Q693B1 232 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 RTL6Q6ICC9 239 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 MOB2Q70IA6 237 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 KCTD9Q7L273 389 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 LINC00518Q8N0U6 118 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 FBXW8Q8N3Y1 598 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 CRYGNQ8WXF5 182 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 RAB3CQ96E17 227 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 LINC00167Q96N53 147 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 PRAM1Q96QH2 718 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 OR5M11Q96RB7 305 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 ST6GALNAC5Q9BVH7 336 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 SLC26A1Q9H2B4 701 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 ASB8Q9H765 288 aa3.64□□□□□ -1.83
PRKDC-205ENST00000535375 SLC15A5A6NIM6 579 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 PSMD3O43242 534 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 HTATSF1O43719 755 aaKnown RBP3.63□□□□□ -1.83
PRKDC-205ENST00000535375 HLA-DPA1P20036 260 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 NDST1P52848 882 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 CXCL6P80162 114 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 RPA4Q13156 261 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 KIAA0040Q15053 153 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 AARDQ4LEZ3 155 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 RHBDD2Q6NTF9 364 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 GCNT7Q6ZNI0 430 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 LUZP1Q86V48 1076 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 CNTN4Q8IWV2 1026 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 CHCHD4Q8N4Q1 142 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 RELL2Q8NC24 303 aaPredicted RBP3.63□□□□□ -1.83
PRKDC-205ENST00000535375 OR8H1Q8NGG4 311 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 OR4L1Q8NH43 312 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 MGARPQ8TDB4 240 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 FAM46BQ96A09 425 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 C19orf43Q9BQ61 176 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 NTMT1Q9BV86 223 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 SLC5A7Q9GZV3 580 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 GANQ9H2C0 597 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 DCTPP1Q9H773 170 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 PRODH2Q9UF12 536 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 SLC9A8Q9Y2E8 581 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 ATG4BQ9Y4P1 393 aa3.63□□□□□ -1.83
PRKDC-205ENST00000535375 KERAO60938 352 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 AKAP3O75969 853 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 STBD1O95210 358 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 TXNDC12O95881 172 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 FCER2P06734 321 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 CYP3A5P20815 502 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 SERPINH1P50454 418 aaKnown RBP3.62□□□□□ -1.83
PRKDC-205ENST00000535375 GEMP55040 296 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 YBEYP58557 167 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms