RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ADIPOR2Q86V24 386 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 IQCHQ86VS3 1027 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CATSPER3Q86XQ3 398 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 KRTAP7-1Q8IUC3 87 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 ARHGAP18Q8N392 663 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 GUF1Q8N442 669 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 MARVELD2Q8N4S9 558 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CAMKVQ8NCB2 501 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CCDC110Q8TBZ0 833 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 LRRC15Q8TF66 581 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CTNNBL1Q8WYA6 563 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.06□□□□□ -1.92
USP48-215ENST00000534705 SEPT8Q92599 483 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CCDC51Q96ER9 411 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 RBM18Q96H35 190 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 PDLIM5Q96HC4 596 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 PAFAH2Q99487 392 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 RAD9AQ99638 391 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 LXNQ9BS40 222 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 WDR13Q9H1Z4 485 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 MTIF3Q9H2K0 278 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 DPAGT1Q9H3H5 408 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CWH43Q9H720 699 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 MINDY3Q9H8M7 445 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 POLE3Q9NRF9 147 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 INIPQ9NRY2 104 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 RGS18Q9NS28 235 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 NRBP2Q9NSY0 501 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 ZDHHC18Q9NUE0 388 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 PANK4Q9NVE7 773 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 COMMD8Q9NX08 183 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 SPHK1Q9NYA1 384 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 TAS2R3Q9NYW6 316 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 NDUFA13Q9P0J0 144 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 NYNRINQ9P2P1 1898 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 EXTL2Q9UBQ6 330 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 ARMCX3Q9UH62 379 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 AURKCQ9UQB9 309 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 SH3GLB1Q9Y371 365 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 TIMM22Q9Y584 194 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 ANGPTL3Q9Y5C1 460 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 MTCH2Q9Y6C9 303 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 SPAG17Q6Q759 2223 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 WDFY4Q6ZS81 3184 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ADGRA3Q8IWK6 1321 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 IGHV4-4A0A075B6R2 117 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 IGKV3D-15A0A087WSY6 115 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 A0A087WW49 117 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 GMNCA6NCL1 334 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ZNF233A6NK53 670 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ANXA2P2A6NMY6 339 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 PP2D1A8MPX8 630 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 C5orf67F2Z3F1 127 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 MCF2LO15068 1137 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ADAMDEC1O15204 470 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ARHGEF9O43307 516 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 DIAPH2O60879 1101 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 CSDE1O75534 798 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 PALMO75781 387 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ZNF189O75820 626 aaPredicted RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 WDPCPO95876 746 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 OAS1P00973 400 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 OPN1MWP04001 364 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 RPSAP08865 295 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 OR52Z1P0C646 297 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 OPN1MW2P0DN77 364 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 OPN1MW3P0DN78 364 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 TROVE2P10155 538 aaKnown RBP eCLIP3.05□□□□□ -1.92
USP48-215ENST00000534705 CCNB1P14635 433 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 DARSP14868 501 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 FOSL2P15408 326 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 GJA1P17302 382 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 GLRA2P23416 452 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 DNAJB1P25685 340 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 RPA1P27694 616 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 YWHABP31946 246 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 SOAT1P35610 550 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ARL2P36404 184 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 CCT6AP40227 531 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 PDX1P52945 283 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 CDH11P55287 796 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 SNU13P55769 128 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 SLC26A5P58743 744 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 NCALDP61601 193 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 RALGDSQ12967 914 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 MRPL28Q13084 256 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 EMC2Q15006 297 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 CTU2Q2VPK5 515 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 CCDC14Q49A88 953 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 SMUG1Q53HV7 270 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ZRANB3Q5FWF4 1079 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 CLLU1OSQ5K130 101 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 SPDYCQ5MJ68 293 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 AGBL2Q5U5Z8 902 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 KRT39Q6A163 491 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 SH2D6Q7Z4S9 175 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ZNF410Q86VK4 478 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 KLHL7Q8IXQ5 586 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 LSMEM2Q8N112 164 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 DAW1Q8N136 415 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms