RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 RNF44Q7L0R7 432 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 ABHD13Q7L211 337 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 PID1Q7Z2X4 250 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 SNX20Q7Z614 316 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 LDB1Q86U70 411 aaPredicted RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 PAQR7Q86WK9 346 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 KRT222Q8N1A0 295 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 CYP4Z2PQ8N1L4 340 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 PRR18Q8N4B5 295 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 PLD5Q8N7P1 536 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 PPM1NQ8N819 430 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 POGLUT1Q8NBL1 392 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 PPFIBP2Q8ND30 876 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 PSD4Q8NDX1 1056 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 OR2M7Q8NG81 312 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 OR2A1Q8NGT9 310 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 OR2L8Q8NGY9 312 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 TBC1D15Q8TC07 691 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM71BQ8TC56 605 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 CREB3L4Q8TEY5 395 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 TSPEARQ8WU66 669 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC44A1Q8WWI5 657 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 IGFBPL1Q8WX77 278 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 ANKRD9Q96BM1 317 aaPredicted RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 SARAFQ96BY9 339 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 CCDC34Q96HJ3 373 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 DNAJC1Q96KC8 554 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 DACH2Q96NX9 599 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 RNF157Q96PX1 679 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 OR2A5Q96R48 311 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 SECISBP2Q96T21 854 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 LPAR4Q99677 370 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 TIMP4Q99727 224 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 FICDQ9BVA6 458 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 RBM24Q9BX46 236 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 DEFB126Q9BYW3 111 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 DRC3Q9H069 523 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 NUP62CLQ9H1M0 184 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 GSTO2Q9H4Y5 243 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 EXO5Q9H790 373 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 ARNT2Q9HBZ2 717 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 NECTIN3Q9NQS3 549 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 C14orf105Q9NVL8 296 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 FBXO34Q9NWN3 711 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 PIH1D1Q9NWS0 290 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 JKAMPQ9P055 326 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 MTRF1LQ9UGC7 380 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 AMACRQ9UHK6 382 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM153AQ9UHL3 310 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF223Q9UK11 482 aaPredicted RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC39A10Q9ULF5 831 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 ERVK-11Q9UQG0 969 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 EIF3LQ9Y262 564 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 KLF13Q9Y2Y9 288 aaPredicted RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 ATP6V1DQ9Y5K8 247 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 SCINQ9Y6U3 715 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 CHD3Q12873 2000 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 WNK1Q9H4A3 2382 aa2.71□□□□□ -1.98
CHMP4A-208ENST00000534106 IGLV3-16A0A075B6K0 115 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TRGV5A0A0B4J1U4 118 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 A0A0G2JK05 382 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TRBV11-1A0A0K0K1C0 115 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 OR2A25A4D2G3 310 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 SERINC4A6NH21 518 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 C3orf70A6NLC5 250 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 GOLGA6L19H0YKK7 550 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 MYO1FO00160 1098 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 LIN7AO14910 233 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC16A6O15403 523 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 MPPED1O15442 326 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 CTIFO43310 598 aaKnown RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 CHST10O43529 356 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TLX2O43763 284 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 LCMT2O60294 686 aaKnown RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF500O60304 480 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 WDR1O75083 606 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 OR2J2O76002 312 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ACSL3O95573 720 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 EPPINO95925 133 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 EPOP01588 193 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 CHRM2P08172 466 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 CCL3P10147 92 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 RALBP11234 206 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 CNR1P21554 472 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 KDELR1P24390 212 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 CYLC1P35663 651 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 CDKN1AP38936 164 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 SOX3P41225 446 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF140P52738 457 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TAS2R50P59544 299 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 UBE2HP62256 183 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 AP2B1P63010 937 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 PTK6Q13882 451 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 KRT31Q15323 416 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TAF1AQ15573 450 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 PGS1Q32NB8 556 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ACSF3Q4G176 576 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TCP11X2Q5H9J9 407 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms