RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	MTRR	Q9UBK8	725 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	RSPH14	Q9UHP6	348 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	RNF24	Q9Y225	148 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	NUDC	Q9Y266	331 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	UMODL1	Q5DID0	1318 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	ABCA7	Q8IZY2	2146 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	FAM170A	A1A519	330 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	TRABD2B	A6NFA1	517 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	FRG2C	A6NGY1	282 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	FOXI3	A8MTJ6	420 aa	Predicted RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	RHBDL1	O75783	438 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	PIGR	P01833	764 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	FCGR3A	P08637	254 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	ABHD2	P08910	425 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	WNT2	P09544	360 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	GIG44	P09565	113 aa	Predicted RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	UMPS	P11172	480 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	AREG	P15514	252 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	FER	P16591	822 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	MARCKS	P29966	332 aa	Predicted RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	IL2RG	P31785	369 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	CASP3	P42574	277 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	ACADSB	P45954	432 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	HNRNPF	P52597	415 aa	Known RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	PPIA	P62937	165 aa	Known RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	HSPA14	Q0VDF9	509 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	TEF	Q10587	303 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	BTG3	Q14201	252 aa	Predicted RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	ANKRD55	Q3KP44	614 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	TIMM50	Q3ZCQ8	353 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	MPPE1	Q53F39	396 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	RNLS	Q5VYX0	342 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	REP15	Q6BDI9	236 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	PNCK	Q6P2M8	343 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	CCBE1	Q6UXH8	406 aa	Predicted RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	APOOL	Q6UXV4	268 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	B3GLCT	Q6Y288	498 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	ADAMTSL2	Q86TH1	951 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	LUZP1	Q86V48	1076 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	C17orf64	Q86WR6	236 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	PEX5L	Q8IYB4	626 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	TMEM185A	Q8NFB2	350 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	AGAP11	Q8TF27	550 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	BIRC7	Q96CA5	298 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	PIWIL1	Q96J94	861 aa	Known RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	GPR137	Q96N19	417 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	ACCS	Q96QU6	501 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	SIRPD	Q9H106	197 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	GAN	Q9H2C0	597 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	PNN	Q9H307	717 aa	Known RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961		Q9HAA7	133 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	CUTC	Q9NTM9	273 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	ARGLU1	Q9NWB6	273 aa	Predicted RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	ZNF581	Q9P0T4	197 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	SEC14L4	Q9UDX3	406 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	FAM153A	Q9UHL3	310 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	MAD2L2	Q9UI95	211 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	VSIG4	Q9Y279	399 aa		2.55	□□□□□ -2
RDX-215	ENST00000533961	MRPL11	Q9Y3B7	192 aa	Known RBP	2.55	□□□□□ -2
RDX-215	ENST00000533961	BCLAF3	A2AJT9	711 aa	Known RBP	2.54	□□□□□ -2
RDX-215	ENST00000533961	TRIM64	A6NGJ6	449 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	TRIM64B	A6NI03	449 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CCS	O14618	274 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	TSC22D2	O75157	780 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	OLFM2	O95897	454 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	ALPI	P09923	528 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	SLC35E2	P0CK97	266 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	HSD17B1	P14061	328 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CYP3A5	P20815	502 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CALML3	P27482	149 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	PTPN4	P29074	926 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	PRDX6	P30041	224 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	AKT2	P31751	481 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	HSPA1L	P34931	641 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	TNFRSF4	P43489	277 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	NSF	P46459	744 aa	Known RBP	2.54	□□□□□ -2
RDX-215	ENST00000533961	NPY2R	P49146	381 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CCL11	P51671	97 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	MFAP2	P55001	183 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CASP9	P55211	416 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	GSTO1	P78417	241 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	NDP	Q00604	133 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	ZNF33B	Q06732	778 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	HKDC1	Q2TB90	917 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CNPY1	Q3B7I2	92 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	NKAIN2	Q5VXU1	208 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CD164L2	Q6UWJ8	174 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	WDR88	Q6ZMY6	472 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	SLC22A16	Q86VW1	577 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	UNC5CL	Q8IV45	518 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	GVQW1	Q8N7I0	195 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	FBXO25	Q8TCJ0	367 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	APOO	Q9BUR5	198 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	TSPYL1	Q9H0U9	437 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	DCTPP1	Q9H773	170 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CLEC5A	Q9NY25	188 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	CYP39A1	Q9NYL5	469 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	MIS18A	Q9NYP9	233 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961		Q9UF83	564 aa		2.54	□□□□□ -2
RDX-215	ENST00000533961	MLX	Q9UH92	298 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms