RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 C11orf49Q9H6J7 331 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 NMNAT1Q9HAN9 279 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 WASH6PQ9NQA3 447 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 MRPS18AQ9NVS2 196 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 C14orf119Q9NWQ9 140 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 RBPJLQ9UBG7 517 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ZMAT5Q9UDW3 170 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLC27A6Q9Y2P4 619 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLC22A7Q9Y694 548 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 UPK1AO00322 258 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 TO15178 435 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 NDUFB5O43674 189 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ZNF821O75541 412 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 PVALBP20472 110 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 DDX6P26196 483 aaKnown RBP eCLIP3.86□□□□□ -1.79
SOX6-217ENST00000533870 XCR1P46094 333 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLC6A12P48065 614 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 AFF1P51825 1210 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLAMF1Q13291 335 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 IL10RAQ13651 578 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ZNF267Q14586 743 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 CARD16Q5EG05 197 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SAXO2Q658L1 398 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 LCTLQ6UWM7 567 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ENPP6Q6UWR7 440 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ZNF550Q7Z398 422 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 COMMD7Q86VX2 200 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 HS6ST3Q8IZP7 471 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ZNF680Q8NEM1 530 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 OR5J2Q8NH18 312 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 FRS2Q8WU20 508 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SMIM4Q8WVI0 70 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 FOXRED1Q96CU9 486 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 PRRT1Q99946 306 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 PINK1Q9BXM7 581 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLC17A5Q9NRA2 495 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 NDOR1Q9UHB4 597 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 PNMA8BQ9ULN7 279 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 A0A1W2PQH9 124 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 BLACEA4D250 179 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 WTIPA6NIX2 430 aaPredicted RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 RHPN2P1A8MT19 583 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ISM1B1AKI9 464 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 MID1O15344 667 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 GPR39O43194 453 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 HSPA12AO43301 675 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 CLEC3AO75596 197 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 KAT7O95251 611 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 TCRBP04435 133 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 MYCLP1P12525 358 aaPredicted RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 CHMP24386 653 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 MPIP34949 423 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 SLC1A3P43003 542 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 EVX1P49640 407 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 HCCSP53701 268 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 VLDLRP98155 873 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ZNF234Q14588 700 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 RHEBQ15382 184 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 HFE2Q6ZVN8 426 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 OVCH1Q7RTY7 1134 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 TRMT11Q7Z4G4 463 aaKnown RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 CADM2Q8N3J6 435 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 LFNGQ8NES3 379 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 GPR148Q8TDV2 347 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 NSMAFQ92636 917 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 COQ8BQ96D53 544 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ZNF668Q96K58 619 aaPredicted RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 MCHR1Q99705 422 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 LPIN3Q9BQK8 851 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 THAP7Q9BT49 309 aaPredicted RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 WACQ9BTA9 647 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 TUBB1Q9H4B7 451 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ACTL8Q9H568 366 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 GPR83Q9NYM4 423 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 SPG21Q9NZD8 308 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 SLC17A6Q9P2U8 582 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 KCND3Q9UK17 655 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 SPO11Q9Y5K1 396 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 MEIKINA0A087WXM9 373 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 C17orf113A0A1B0GUU1 675 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 OR2AT4A6NND4 320 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 E2F3O00716 465 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ZNF749O43361 778 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 GPR32O75388 356 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 AMD1P17707 334 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 S100A11P31949 105 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 EPHX2P34913 555 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 SLC16A1P53985 500 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 TAS2R50P59544 299 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 CCINQ13939 588 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 DOC2AQ14183 400 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ZNF460Q14592 562 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 RNASE10Q5GAN6 216 aaKnown RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 C9orf64Q5T6V5 341 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 TRILQ7L0X0 811 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 CLIP4Q8N3C7 705 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ATAD1Q8NBU5 361 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 OR7D4Q8NG98 312 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ELMOD3Q96FG2 381 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 MSANTD3Q96H12 275 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms