RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 C1GALT1Q9NS00 363 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 NSG1A0A0A6YYJ2 146 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 FAM227AF5H4B4 570 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 FOXE1O00358 373 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 SCO2O43819 266 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF432O94892 652 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ALDOAP04075 364 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PEPDP12955 493 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CD46P15529 392 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 AOAHP28039 575 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 YAP1P46937 504 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC6A8P48029 635 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 DNASE1L3Q13609 305 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 C14orf28Q4W4Y0 310 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 UBAP2Q5T6F2 1119 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 RAET1LQ5VY80 246 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ULK3Q6PHR2 472 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ENPP6Q6UWR7 440 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 RNF130Q86XS8 419 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CDRT4Q8N9R6 151 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CANT1Q8WVQ1 401 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 RHBDF1Q96CC6 855 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 FEZF1A0PJY2 475 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 TLCD2A6NGC4 264 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 NOBOXO60393 691 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ABCB7O75027 752 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 GBAP04062 536 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 DCNP07585 359 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CHRM5P08912 532 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 BCKDHAP12694 445 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF20P17024 532 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 GBX2P52951 348 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 HSD11B2P80365 405 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PMS2P3Q13401 168 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CRTC2Q53ET0 693 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 GARNL3Q5VVW2 1013 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 BPHLQ86WA6 291 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF761Q86XN6 746 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF100Q8IYN0 542 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ELMOD2Q8IZ81 293 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 LGI4Q8N135 537 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 OR6K6Q8NGW6 343 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 C9orf43Q8TAL5 461 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ITPKCQ96DU7 683 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ZBTB26Q9HCK0 441 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 COMMD3Q9UBI1 195 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ARPC4-TTLL3A0A0A6YYG9 625 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 LATO43561 262 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CPNE6O95741 557 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ERCC1P07992 297 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CLCN2P51788 898 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PUM1Q14671 1186 aaKnown RBP eCLIP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 BCL7AQ4VC05 210 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 TMEM31Q5JXX7 168 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CXorf57Q6NSI4 855 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ARL9Q6T311 187 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 SYT13Q7L8C5 426 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PNLDC1Q8NA58 520 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 OR5K2Q8NHB8 316 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PHOX2BQ99453 314 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 OR51V1Q9H2C8 321 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 TREX1Q9NSU2 369 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 GRHPRQ9UBQ7 328 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CIB4A0PJX0 185 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PLOD2O00469 737 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 MBTPS2O43462 519 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ZFAND5O76080 213 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 APOC1P02654 83 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC2A2P11168 524 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 AOC1P19801 751 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PON3Q15166 354 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 UGT3A2Q3SY77 523 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 OR2T5Q6IEZ7 315 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF433Q8N7K0 673 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 OR2T29Q8NH02 315 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 NANOS1Q8WY41 292 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC6A18Q96N87 628 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PKP2Q99959 881 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 CHIAQ9BZP6 476 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 MALT1Q9UDY8 824 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PCTPQ9UKL6 214 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 MGAT4BQ9UQ53 548 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 PCDHGB2Q9Y5G2 931 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 ACTL7AQ9Y615 435 aa10.72□□□□□ -0.69
AMBRA1-211ENST00000533727 WNK3Q9BYP7 1800 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 ANKRD28O15084 1053 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 HTRA2O43464 458 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 SCRG1O75711 98 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF404Q494X3 552 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 XKRXQ6PP77 449 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 TMPPEQ6ZT21 453 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 ALDH16A1Q8IZ83 802 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 ZSCAN4Q8NAM6 433 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 SH3YL1Q96HL8 342 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 ALOXE3Q9BYJ1 711 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 CUTCQ9NTM9 273 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 DAPL1A0PJW8 107 aa10.71□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF670-ZNF695F2Z2N8 137 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms