RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TM4SF18Q96CE8 201 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 KCNA7Q96RP8 456 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 DMRTA2Q96SC8 542 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 FAIM2Q9BWQ8 316 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 OR10A5Q9H207 317 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 TP63Q9H3D4 680 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-225ENST00000533704 MID1IP1Q9NPA3 183 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 CHST11Q9NPF2 352 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 COQ3Q9NZJ6 369 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 VPS29Q9UBQ0 182 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 FETUBQ9UGM5 382 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 DCDC2Q9UHG0 476 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 BOKQ9UMX3 212 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-225ENST00000533704 TIMM22Q9Y584 194 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 MED12Q93074 2177 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 FAM90A27PA6NNH2 459 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 CAPN14A8MX76 684 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 C19orf84I3L1E1 186 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 TP53I11O14683 189 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 PCDH7O60245 1069 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 GLRA3O75311 464 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 CRCPO75575 148 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 GLSO94925 669 aaPredicted RBP9.61□□□□□ -0.87
CAPN1-225ENST00000533704 IL3P08700 152 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 FBXO45P0C2W1 286 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 CSNK2A2P19784 350 aaPredicted RBP9.61□□□□□ -0.87
CAPN1-225ENST00000533704 AGAP20933 346 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 MAN2A2P49641 1150 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 NRG3P56975 720 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 FBXW4P57775 412 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 HMGCS1Q01581 520 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 ACSM2AQ08AH3 577 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 FOXO1Q12778 655 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 CSTF3Q12996 717 aaKnown RBP9.61□□□□□ -0.87
CAPN1-225ENST00000533704 SLC10A1Q14973 349 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 LTB4RQ15722 352 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 SPDYAQ5MJ70 313 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 ACSM2BQ68CK6 577 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 TMEM211Q6ICI0 200 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 SLC48A1Q6P1K1 146 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 TRILQ7L0X0 811 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 DND1Q8IYX4 353 aaKnown RBP9.61□□□□□ -0.87
CAPN1-225ENST00000533704 VWA5B2Q8N398 1253 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 FBXW8Q8N3Y1 598 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 RPRMLQ8N4K4 120 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF615Q8N8J6 731 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 EPS8L3Q8TE67 593 aaKnown RBP9.61□□□□□ -0.87
CAPN1-225ENST00000533704 PAQR8Q8TEZ7 354 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 CA5BP1Q8WTZ4 195 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 MZB1Q8WU39 189 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 EXOSC8Q96B26 276 aaKnown RBP9.61□□□□□ -0.87
CAPN1-225ENST00000533704 L3HYPDHQ96EM0 354 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 DOHHQ9BU89 302 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 EBPLQ9BY08 206 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 ACPTQ9BZG2 426 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 ZDHHC11Q9H8X9 412 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 PNPLA3Q9NST1 481 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 ALKBH4Q9NXW9 302 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 UTS2RQ9UKP6 389 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 ACAD8Q9UKU7 415 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 PSME2Q9UL46 239 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 EMCNQ9ULC0 261 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 STK38LQ9Y2H1 464 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 HRH3Q9Y5N1 445 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF780BQ9Y6R6 833 aa9.61□□□□□ -0.87
CAPN1-225ENST00000533704 TRGV5A0A0B4J1U4 118 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CCDC151A5D8V7 595 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 RRP9O43818 475 aaKnown RBP9.6□□□□□ -0.87
CAPN1-225ENST00000533704 ENO1P06733 434 aaKnown RBP9.6□□□□□ -0.87
CAPN1-225ENST00000533704 RFPL3SP0C7P2 107 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 HSD3B1P14060 373 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 HSD3B2P26439 372 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 GDF1P27539 372 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 MASP1P48740 699 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 TRPC1P48995 793 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 PKNOX1P55347 436 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 DUSP2Q05923 314 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 PMPCAQ10713 525 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 FUT7Q11130 342 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 RPS6KA2Q15349 733 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 TOMM20Q15388 145 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 NTRK2Q16620 822 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 IMPG1Q17R60 797 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 GXYLT1Q4G148 440 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 EMC4Q5J8M3 183 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CFAP157Q5JU67 520 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 BICRALQ6AI39 1079 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 ZYG11AQ6WRX3 759 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CCDC71Q8IV32 467 aaPredicted RBP9.6□□□□□ -0.87
CAPN1-225ENST00000533704 C4orf33Q8N1A6 199 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 LIX1Q8N485 282 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 MARVELD2Q8N4S9 558 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF441Q8N8Z8 693 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 OR7G1Q8NGA0 311 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 OR10Q1Q8NGQ4 319 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CHTF18Q8WVB6 975 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 RND1Q92730 232 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CCDC126Q96EE4 140 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 APIPQ96GX9 242 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms