RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 IDO1P14902 403 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 S1PR1P21453 382 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 MLF1P58340 268 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 MRPS35P82673 323 aaKnown RBP13.54□□□□□ -0.24
SF3B2-214ENST00000533595 RPS6KA2Q15349 733 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 MPEG1Q2M385 716 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 TRMT12Q53H54 448 aaKnown RBP13.54□□□□□ -0.24
SF3B2-214ENST00000533595 ZNF628Q5EBL2 1059 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 TMEM198Q66K66 360 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 SLC29A4Q7RTT9 530 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 C9orf40Q8IXQ3 194 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 ARMC10Q8N2F6 343 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 ZADH2Q8N4Q0 377 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 NATD1Q8N6N6 113 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 OR5L2Q8NGL0 311 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 ZFP28Q8NHY6 868 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 KAT2AQ92830 837 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 COQ8BQ96D53 544 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 ERP27Q96DN0 273 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 THOC1Q96FV9 657 aaKnown RBP13.54□□□□□ -0.24
SF3B2-214ENST00000533595 EBF4Q9BQW3 602 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 SIKE1Q9BRV8 207 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 CCDC28BQ9BUN5 200 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 OR10A5Q9H207 317 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 GLIPR2Q9H4G4 154 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 NPHS2Q9NP85 383 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 SLAMF7Q9NQ25 335 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 ACSS1Q9NUB1 689 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-214ENST00000533595 FGFR1OP2Q9NVK5 253 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 ZNF639Q9UID6 485 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 GPR45Q9Y5Y3 372 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 BSNQ9UPA5 3926 aa13.54□□□□□ -0.24
SF3B2-214ENST00000533595 CPAMD8Q8IZJ3 1885 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 SMG1Q96Q15 3661 aaKnown RBP13.53□□□□□ -0.24
SF3B2-214ENST00000533595 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 TMEM200CA6NKL6 621 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 FCHO1O14526 889 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 WDPCPO95876 746 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 SOX18P35713 384 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 FRKP42685 505 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-214ENST00000533595 CLNS1AP54105 237 aaKnown RBP13.53□□□□□ -0.24
SF3B2-214ENST00000533595 MANFP55145 182 aaKnown RBP13.53□□□□□ -0.24
SF3B2-214ENST00000533595 ARG2P78540 354 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 EXOSC7Q15024 291 aaKnown RBP13.53□□□□□ -0.24
SF3B2-214ENST00000533595 GSTA3Q16772 222 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 PGS1Q32NB8 556 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 ZNF551Q7Z340 670 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-214ENST00000533595 CAMKMTQ7Z624 323 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 BEST3Q8N1M1 668 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 ZNF615Q8N8J6 731 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 NUBPLQ8TB37 319 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 NUDT8Q8WV74 236 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 STON2Q8WXE9 905 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 BHLHE41Q9C0J9 482 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-214ENST00000533595 RNF32Q9H0A6 362 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 PLA2G3Q9NZ20 509 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 MYOTQ9UBF9 498 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 BCAP29Q9UHQ4 241 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 DCTN4Q9UJW0 460 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 CFL2Q9Y281 166 aa13.53□□□□□ -0.24
SF3B2-214ENST00000533595 COL6A6A6NMZ7 2263 aa13.52□□□□□ -0.24
SF3B2-214ENST00000533595 E9PBE3 544 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 WWP2O00308 870 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 PLOD3O60568 738 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 PRAMEF2O60811 474 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 ITGA10O75578 1167 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 BCAS2O75934 225 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 CBX7O95931 251 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 CD97P48960 835 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 NME5P56597 212 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 UFM1P61960 85 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 SRSF11Q05519 484 aaKnown RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 KLRB1Q12918 225 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 HSPB3Q12988 150 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 EBPQ15125 230 aaKnown RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 PDCD4Q53EL6 469 aaKnown RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 SOWAHCQ53LP3 525 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 HLA-DQA1Q5Y7H0 255 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 RBMXL3Q8N7X1 1067 aaKnown RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 TEX19Q8NA77 164 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 OR7G2Q8NG99 324 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 OR52R1Q8NGF1 315 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 RFWD2Q8NHY2 731 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 HAS2Q92819 552 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 TESCQ96BS2 214 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 MARK4Q96L34 752 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 GAL3ST4Q96RP7 486 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 DUSP26Q9BV47 211 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 WWTR1Q9GZV5 400 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 ANKRA2Q9H9E1 313 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 LIN28AQ9H9Z2 209 aaKnown RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 YARS2Q9Y2Z4 477 aaKnown RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 CFAP46Q8IYW2 2715 aa13.52□□□□□ -0.25
SF3B2-214ENST00000533595 PRRC2CQ9Y520 2896 aaKnown RBP13.52□□□□□ -0.25
SF3B2-214ENST00000533595 A0A087WV62 115 aa13.51□□□□□ -0.25
SF3B2-214ENST00000533595 A0A0G2JND7 137 aa13.51□□□□□ -0.25
SF3B2-214ENST00000533595 C2orf92A0A1B0GVN3 265 aa13.51□□□□□ -0.25
SF3B2-214ENST00000533595 A0A1W2PRB8 838 aa13.51□□□□□ -0.25
SF3B2-214ENST00000533595 OR5H15A6NDH6 313 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms