RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 EDN3P14138 238 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 SDC1P18827 310 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 BGNP21810 368 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 PTGER1P34995 402 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 RPL38P63173 70 aaKnown RBP18.91■□□□□ 0.62
CCS-208ENST00000533244 MRPL49Q13405 166 aaKnown RBP18.91■□□□□ 0.62
CCS-208ENST00000533244 LTB4RQ15722 352 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 ZNF628Q5EBL2 1059 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 C6orf163Q5TEZ5 329 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 AGBL2Q5U5Z8 902 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 FAM111BQ6SJ93 734 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 OPN5Q6U736 354 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 CLEC18BQ6UXF7 455 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 MDGA2Q7Z553 956 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 SLC15A4Q8N697 577 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 ANKRD42Q8N9B4 389 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 CLEC18CQ8NCF0 446 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 ZNF764Q96H86 408 aaPredicted RBP18.91■□□□□ 0.62
CCS-208ENST00000533244 EGLN2Q96KS0 407 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 C3orf30Q96M34 536 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 FRMD6Q96NE9 622 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 SORT1Q99523 831 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.91■□□□□ 0.62
CCS-208ENST00000533244 KLF13Q9Y2Y9 288 aaPredicted RBP18.91■□□□□ 0.62
CCS-208ENST00000533244 ESPL1Q14674 2120 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 MYO1GB0I1T2 1018 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 CBX7O95931 251 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 DUSP8Q13202 625 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 MAPKAPK3Q16644 382 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 HHATQ5VTY9 493 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 IL20RBQ6UXL0 311 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 TICAM1Q8IUC6 712 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 CCDC116Q8IYX3 515 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 ZNF781Q8N8C0 355 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 CDC26Q8NHZ8 85 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 SLC22A8Q8TCC7 542 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 TP53INP1Q96A56 240 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 PPP3R2Q96LZ3 170 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 GAL3ST4Q96RP7 486 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 BRINP2Q9C0B6 783 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 ENTPD4Q9Y227 616 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 RAP2CQ9Y3L5 183 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 MST1P26927 711 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 SLC1A6P48664 564 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 ZNF791Q3KP31 576 aaPredicted RBP18.9■□□□□ 0.62
CCS-208ENST00000533244 GOLM1Q8NBJ4 401 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 FAM98AQ8NCA5 519 aaKnown RBP18.9■□□□□ 0.62
CCS-208ENST00000533244 PSD4Q8NDX1 1056 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 C17orf47Q8NEP4 570 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 ADCY4Q8NFM4 1077 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 C16orf52Q8NHV5 167 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 ADIPOR1Q96A54 375 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 ARL8AQ96BM9 186 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 ERP27Q96DN0 273 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 SGCZQ96LD1 299 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 TIMMDC1Q9NPL8 285 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 MIEF1Q9NQG6 463 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 GIMAP4Q9NUV9 329 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 GIMAP2Q9UG22 337 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 ERVK-11Q9UQG0 969 aa18.9■□□□□ 0.62
CCS-208ENST00000533244 USP9XQ93008 2570 aaPredicted RBP18.9■□□□□ 0.62
CCS-208ENST00000533244 SVILO95425 2214 aa18.89■□□□□ 0.62
CCS-208ENST00000533244 LRRK2Q5S007 2527 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 C2orf92A0A1B0GVN3 265 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 ANKUB1A6NFN9 424 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 TBX19O60806 448 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 SKAP2O75563 359 aaPredicted RBP18.89■□□□□ 0.61
CCS-208ENST00000533244 JUNP05412 331 aaKnown RBP18.89■□□□□ 0.61
CCS-208ENST00000533244 PCSK2P16519 638 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 GPX3P22352 226 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 SRSF1Q07955 248 aaKnown RBP eCLIP18.89■□□□□ 0.611e-6■□□□□ 10.5
CCS-208ENST00000533244 BST1Q10588 318 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 STX3Q13277 289 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 GALNTL6Q49A17 601 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 TRMT12Q53H54 448 aaKnown RBP18.89■□□□□ 0.61
CCS-208ENST00000533244 RTL4Q6ZR62 310 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.89■□□□□ 0.61
CCS-208ENST00000533244 SIMC1Q8NDZ2 872 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 OR9A2Q8NGT5 310 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 SH2D2AQ9NP31 389 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 PFDN4Q9NQP4 134 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 ARGLU1Q9NWB6 273 aaPredicted RBP18.89■□□□□ 0.61
CCS-208ENST00000533244 DTX4Q9Y2E6 619 aa18.89■□□□□ 0.61
CCS-208ENST00000533244 HIVEP3Q5T1R4 2406 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 ATP6AP2A0A1C7CYW4 349 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 ATP6AP2O75787 350 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 FBXO45P0C2W1 286 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 BCKDHAP12694 445 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 MPIP34949 423 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 MRPS35P82673 323 aaKnown RBP18.88■□□□□ 0.61
CCS-208ENST00000533244 PDE7AQ13946 482 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 EXOSC7Q15024 291 aaKnown RBP18.88■□□□□ 0.61
CCS-208ENST00000533244 C6orf136Q5SQH8 315 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 SULF2Q8IWU5 870 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 DND1Q8IYX4 353 aaKnown RBP18.88■□□□□ 0.61
CCS-208ENST00000533244 FAM9CQ8IZT9 166 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 KIRREL3Q8IZU9 778 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 CPSF7Q8N684 471 aaKnown RBP18.88■□□□□ 0.61
CCS-208ENST00000533244 POGLUT1Q8NBL1 392 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 SPACA9Q96E40 222 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms