RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 IMPG1Q17R60 797 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 RUNDC3AQ59EK9 446 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 C1orf189Q5VU69 101 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 AGAP7PQ5VUJ5 663 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 FAM180AQ6UWF9 173 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 UBE2R2Q712K3 238 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 PATL1Q86TB9 770 aaKnown RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 FJX1Q86VR8 437 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 CFAP206Q8IYR0 622 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 C19orf47Q8N9M1 422 aaKnown RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 SKA2Q8WVK7 121 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ULK4Q96C45 1275 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 AGAP4Q96P64 663 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 OR52E6Q96RD3 313 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 SLX1AQ9BQ83 275 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 HAUS8Q9BT25 410 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 SPRTNQ9H040 489 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 KLHL25Q9H0H3 589 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ATG10Q9H0Y0 220 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 KAT8Q9H7Z6 458 aaKnown RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ACTR8Q9H981 624 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 SLC6A20Q9NP91 592 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 PFDN4Q9NQP4 134 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ADGRE2Q9UHX3 823 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 FBXL4Q9UKA2 621 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 SLC22A14Q9Y267 594 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 C17orf113A0A1B0GUU1 675 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 IFRD1O00458 451 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 SEC16AO15027 2179 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 WDR47O94967 919 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ATE1O95260 518 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 CLDN9O95484 217 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 RAP2AP10114 183 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 PRLHRP49683 370 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 DYNC1I2Q13409 638 aaKnown RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 KRTAP21-3Q3LHN1 58 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 CCSMST1Q4G0I0 132 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 NKAIN1Q4KMZ8 207 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 SPESP1Q6UW49 350 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 STK32CQ86UX6 486 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 AMIGO1Q86WK6 493 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 CLVS1Q8IUQ0 354 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ADGRF3Q8IZF5 1079 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 LMNTD1Q8N9Z9 388 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 OR52E1Q8NGJ3 308 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ITLN2Q8WWU7 325 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ASB11Q8WXH4 323 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 FKBP10Q96AY3 582 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 ISOC1Q96CN7 298 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 CCDC115Q96NT0 180 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 EBPLQ9BY08 206 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 AMBRA1Q9C0C7 1298 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 TMEM45AQ9NWC5 275 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 C1orf109Q9NX04 203 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 VNN3Q9NY84 501 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 EIF3LQ9Y262 564 aaKnown RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 DYTNA2CJ06 578 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 SLC28A1O00337 649 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 CXCR6O00574 342 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 PCDH17O14917 1159 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ANXA5P08758 320 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 IL7RP16871 459 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 EFNA1P20827 205 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-207ENST00000533242 MMP11P24347 488 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 STT3AP46977 705 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 SLC6A12P48065 614 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 EMP3P54852 163 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 RAB39AQ14964 217 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 LAPTM4AQ15012 233 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ADRM1Q16186 407 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 AP1ARQ63HQ0 302 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 LAIR2Q6ISS4 152 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 BCORP1Q8N888 145 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ADAMTS16Q8TE57 1224 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 SELENOMQ8WWX9 145 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 C12orf43Q96C57 262 aaKnown RBP7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ITCHQ96J02 903 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 MBOAT4Q96T53 435 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 CPPED1Q9BRF8 314 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-207ENST00000533242 BDH2Q9BUT1 245 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 OR52A5Q9H2C5 316 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 TOR3AQ9H497 397 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 EPS8L2Q9H6S3 715 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 GORASP2Q9H8Y8 452 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 FAM60AQ9NP50 221 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 EXD2Q9NVH0 621 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 U3KQV3 271 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 A0A087WXM4 84 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ELOVL7A1L3X0 281 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ZSCAN9O15535 394 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-207ENST00000533242 SH3BGRLO75368 114 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 JRKO75564 520 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ONECUT2O95948 504 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 IL6P05231 212 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 UGT2B7P16662 529 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 CD247P20963 164 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ALDH3A2P51648 485 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 PIGFQ07326 219 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 DAG1Q14118 895 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 NEDD8Q15843 81 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms