RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TSC22D4Q9Y3Q8 395 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 HRH3Q9Y5N1 445 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 LOC105369274A0A096LPK9 316 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 LOC102723532A0A0G2JNH3 316 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 A0A0J9YVX5 310 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 TRBC2A0A5B9 178 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 FEZF1A0PJY2 475 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 A6NNC1 897 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 GABRR3A8MPY1 467 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 MAGEB17A8MXT2 336 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 HAT1O14929 419 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 LSM1O15116 133 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 OR1F1O43749 312 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 NME2P1O60361 137 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 SEC22BO75396 215 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 SLC25A12O75746 678 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 NEURL1O76050 574 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 SEC24DO94855 1032 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 UBOX5O94941 541 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 CYC1P08574 325 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 ALDOCP09972 364 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 NME2P22392 152 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 PIK3CBP42338 1070 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 SCTRP47872 440 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 DLX5P56178 289 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 NUP107P57740 925 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 RPS13P62277 151 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 EMX2Q04743 252 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 CSTF3Q12996 717 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 KLF10Q13118 480 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 EXT1Q16394 746 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 GALNTL6Q49A17 601 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 ATP6AP1LQ52LC2 224 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 RFTN2Q52LD8 501 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 C10orf62Q5T681 223 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 ADNP2Q6IQ32 1131 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 ZNF425Q6IV72 752 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 OGFOD2Q6N063 350 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 FBXO42Q6P3S6 717 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 ARHGAP11AQ6P4F7 1023 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 CCDC121Q6ZUS5 278 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 CPEB2Q7Z5Q1 589 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 TREML1Q86YW5 311 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 OR4N4Q8N0Y3 316 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 LGI4Q8N135 537 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 AMER3Q8N944 861 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 ANKRD53Q8N9V6 530 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 FNDC5Q8NAU1 212 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 CMTM7Q96FZ5 175 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 MARK4Q96L34 752 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 C10orf90Q96M02 699 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 CCDC106Q9BWC9 280 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 RHBGQ9H310 441 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 ZNF385DQ9H6B1 395 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 BRF2Q9HAW0 419 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 DMRT3Q9NQL9 472 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 C1orf109Q9NX04 203 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 VPS29Q9UBQ0 182 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 ADGRE2Q9UHX3 823 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 SLC12A4Q9UP95 1085 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 KLK4Q9Y5K2 254 aa10.52□□□□□ -0.73
TRAPPC4-213ENST00000533149 SNRNP200O75643 2136 aaKnown RBP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 AKAP6Q13023 2319 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 MAP1AP78559 2803 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 ANKDD1BA6NHY2 528 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 CAPN14A8MX76 684 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 NPIPB8E9PQR5 432 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 NRP2O60462 931 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 CDC40O60508 579 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 SH3BGRLO75368 114 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 RSL1D1O76021 490 aaKnown RBP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 ETHE1O95571 254 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 TGFB1P01137 390 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 PRPH2P23942 346 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 PTX3P26022 381 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 GRK3P35626 688 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 BCL6P41182 706 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 ZFP36L2P47974 494 aaKnown RBP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 DIO3P55073 304 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 TAS2R50P59544 299 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 ERVK-8P63133 956 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 NKX6-1P78426 367 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 PHEXP78562 749 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 KRT72Q14CN4 511 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 NAA25Q14CX7 972 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 KIAA0040Q15053 153 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 RPS6KA2Q15349 733 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 SMU1Q2TAY7 513 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 IL23RQ5VWK5 629 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 FAM91A1Q658Y4 838 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 RNF44Q7L0R7 432 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 VN1R5Q7Z5H4 357 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 TBC1D19Q8N5T2 526 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 AMER2Q8N7J2 671 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 MFSD9Q8NBP5 474 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 SIMC1Q8NDZ2 872 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 OR5M3Q8NGP4 307 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 OR10Q1Q8NGQ4 319 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms