RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MS4A12Q9NXJ0 267 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 SLC39A1Q9NY26 324 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 SRPK3Q9UPE1 567 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 MAP4K5Q9Y4K4 846 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 PDLIM1O00151 329 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 SOCS2O14508 198 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 LYNP07948 512 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 UBTFL6P0CB48 400 aaPredicted RBP17.36■□□□□ 0.37
SMPD1-208ENST00000533123 RAP2AP10114 183 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 NR2F6P10588 404 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 FCGR1AP12314 374 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 CHI3L1P36222 383 aaPredicted RBP17.36■□□□□ 0.37
SMPD1-208ENST00000533123 ETV5P41161 510 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 MANFP55145 182 aaKnown RBP17.36■□□□□ 0.37
SMPD1-208ENST00000533123 CHRNB3Q05901 458 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 MAP7Q14244 749 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 ATP6AP1Q15904 470 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 RNF130Q86XS8 419 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 OR52E4Q8NGH9 312 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 CLIP3Q96DZ5 547 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 SLC47A1Q96FL8 570 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 CENPNQ96H22 339 aaPredicted RBP17.36■□□□□ 0.37
SMPD1-208ENST00000533123 FAM192AQ9GZU8 254 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 CORO2BQ9UQ03 480 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 DCHS1Q96JQ0 3298 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 CYR61O00622 381 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 MAPK10P53779 464 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 TMEM52Q8NDY8 209 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 OR51Q1Q8NH59 317 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 COL26A1Q96A83 441 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 LIN37Q96GY3 246 aaPredicted RBP17.36■□□□□ 0.37
SMPD1-208ENST00000533123 YIPF2Q9BWQ6 316 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 UGT2B28Q9BY64 529 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 OAZ3Q9UMX2 235 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 SPACA6W5XKT8 324 aa17.36■□□□□ 0.37
SMPD1-208ENST00000533123 A0A1W2PNU3 283 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 B4E171 279 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 SLC30A4O14863 429 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 UQCRBP14927 111 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 AQP1P29972 269 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 TLX1P31314 330 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 PTGER1P34995 402 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 TSPAN7P41732 249 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 CDK9P50750 372 aaKnown RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 RAB38P57729 211 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 FOLH1Q04609 750 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 ERV3-1Q14264 604 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 SLC48A1Q6P1K1 146 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 ERICH5Q6P6B1 374 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 OR52N2Q8NGI0 321 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 ZNF304Q9HCX3 659 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 PISDQ9UG56 409 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 CES1P1Q9UKY3 287 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 CDV3Q9UKY7 258 aaKnown RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 CDC14AQ9UNH5 594 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 RNF103-CHMP3A0A140T963 221 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 A0A1W2PS29 197 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 ERAL1O75616 437 aaKnown RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 CDC123O75794 336 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 ZNF682O95780 498 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 JMJD7P0C870 316 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 ZNF28P17035 718 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 FRKP42685 505 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 RPS26P62854 115 aaKnown RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 ZNF750Q32MQ0 723 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 ZBTB49Q6ZSB9 765 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 CBR4Q8N4T8 237 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 OR5P2Q8WZ92 322 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 VPS50Q96JG6 964 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 SIRT3Q9NTG7 399 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 EHD3Q9NZN3 535 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 FAF1Q9UNN5 650 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-208ENST00000533123 B3GALT1Q9Y5Z6 326 aa17.35■□□□□ 0.37
SMPD1-208ENST00000533123 C7orf72A4D263 438 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 TNFRSF21O75509 655 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 LDLRP01130 860 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 RNH1P13489 461 aaKnown RBP17.34■□□□□ 0.37
SMPD1-208ENST00000533123 UQCRC2P22695 453 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 XCR1P46094 333 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 CRYBA2P53672 197 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 TARDBPQ13148 414 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMPD1-208ENST00000533123 MARCH9Q86YJ5 346 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 OR4N5Q8IXE1 308 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 ZNF764Q96H86 408 aaPredicted RBP17.34■□□□□ 0.37
SMPD1-208ENST00000533123 EPS8L2Q9H6S3 715 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 SLC35C2Q9NQQ7 365 aa17.34■□□□□ 0.37
SMPD1-208ENST00000533123 CNOT11Q9UKZ1 510 aaKnown RBP17.34■□□□□ 0.37
SMPD1-208ENST00000533123 JRKO75564 520 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 C8orf89P0DMQ9 161 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 KDELR2P33947 212 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 DSG2Q14126 1118 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 C6orf52Q5T4I8 152 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 ARHGAP40Q5TG30 622 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 ZBED6CLQ96FA7 236 aaPredicted RBP17.33■□□□□ 0.37
SMPD1-208ENST00000533123 BTBD9Q96Q07 612 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 SPATA9Q9BWV2 254 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 GLIPR2Q9H4G4 154 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 NTN4Q9HB63 628 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 OLAHQ9NV23 265 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms