RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TM9SF4Q92544 642 aa20.71■□□□□ 0.91
LRRK1-208ENST00000532029 TESCQ96BS2 214 aa20.71■□□□□ 0.91
LRRK1-208ENST00000532029 CTHRC1Q96CG8 243 aa20.71■□□□□ 0.91
LRRK1-208ENST00000532029 ERP27Q96DN0 273 aa20.71■□□□□ 0.91
LRRK1-208ENST00000532029 LMF1Q96S06 567 aa20.71■□□□□ 0.91
LRRK1-208ENST00000532029 TMEM120AQ9BXJ8 343 aa20.71■□□□□ 0.91
LRRK1-208ENST00000532029 CDCP1Q9H5V8 836 aa20.71■□□□□ 0.91
LRRK1-208ENST00000532029 SLAMF7Q9NQ25 335 aa20.71■□□□□ 0.91
LRRK1-208ENST00000532029 MED13Q9UHV7 2174 aa20.7■□□□□ 0.91
LRRK1-208ENST00000532029 CHD6Q8TD26 2715 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 A0A1W2PRB8 838 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 OR6C76A6NM76 312 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 SLC22A3O75751 556 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 BCAS2O75934 225 aaPredicted RBP20.7■□□□□ 0.9
LRRK1-208ENST00000532029 FRKP42685 505 aaPredicted RBP20.7■□□□□ 0.9
LRRK1-208ENST00000532029 KIR3DL1P43629 444 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 ARFIP2P53365 341 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 SLC37A1P57057 533 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 GNGT1P63211 74 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 RNF4P78317 190 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 SF3A3Q12874 501 aaKnown RBP eCLIP20.7■□□□□ 0.9
LRRK1-208ENST00000532029 LY6DQ14210 128 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 TRMT12Q53H54 448 aaKnown RBP20.7■□□□□ 0.9
LRRK1-208ENST00000532029 CGB2Q6NT52 195 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 PCSK4Q6UW60 755 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 ASB18Q6ZVZ8 466 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 HPS6Q86YV9 775 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 LGI4Q8N135 537 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 GLB1L3Q8NCI6 653 aaPredicted RBP20.7■□□□□ 0.9
LRRK1-208ENST00000532029 OR10A5Q9H207 317 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 CLMPQ9H6B4 373 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 ZNF71Q9NQZ8 489 aaPredicted RBP20.7■□□□□ 0.9
LRRK1-208ENST00000532029 SDR39U1Q9NRG7 319 aaPredicted RBP20.7■□□□□ 0.9
LRRK1-208ENST00000532029 ZIM2Q9NZV7 527 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 ZNF639Q9UID6 485 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 TRIM33Q9UPN9 1127 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 CFL2Q9Y281 166 aa20.7■□□□□ 0.9
LRRK1-208ENST00000532029 ATXN7O15265 892 aaPredicted RBP20.69■□□□□ 0.9
LRRK1-208ENST00000532029 PRKNO60260 465 aaPredicted RBP20.69■□□□□ 0.9
LRRK1-208ENST00000532029 PRAMEF2O60811 474 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 EFNA1P20827 205 aaPredicted RBP20.69■□□□□ 0.9
LRRK1-208ENST00000532029 S1PR1P21453 382 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 LSP1P33241 339 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 S100A3P33764 101 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 MLF1P58340 268 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 IRX1P78414 480 aaPredicted RBP20.69■□□□□ 0.9
LRRK1-208ENST00000532029 EXOSC7Q15024 291 aaKnown RBP20.69■□□□□ 0.9
LRRK1-208ENST00000532029 HLA-DQA1Q5Y7H0 255 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 OR4F3Q6IEY1 312 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 TMEM107Q6UX40 140 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 C9orf40Q8IXQ3 194 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 ZNF615Q8N8J6 731 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 VPS37AQ8NEZ2 397 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 OR52R1Q8NGF1 315 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 OR5P2Q8WZ92 322 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 NSRP1Q9H0G5 558 aaKnown RBP20.69■□□□□ 0.9
LRRK1-208ENST00000532029 SLC25A18Q9H1K4 315 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 FAM53CQ9NYF3 392 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 STMN3Q9NZ72 180 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 KLHL14Q9P2G3 628 aa20.69■□□□□ 0.9
LRRK1-208ENST00000532029 FCHO1O14526 889 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 PLOD3O60568 738 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 CBX7O95931 251 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 PDGFAP04085 211 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 CLPSP04118 112 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 NCF2P19878 526 aaPredicted RBP20.68■□□□□ 0.9
LRRK1-208ENST00000532029 MC3RP41968 323 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 MLC1Q15049 377 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 FAM174BQ3ZCQ3 159 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 SPANXN4Q5MJ08 99 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 ANXA8L1Q5VT79 327 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 ZADH2Q8N4Q0 377 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 LSM14AQ8ND56 463 aaKnown RBP20.68■□□□□ 0.9
LRRK1-208ENST00000532029 OR7G2Q8NG99 324 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 OR8J2Q8NGG1 315 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 NUBPLQ8TB37 319 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 ELP4Q96EB1 424 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 MAGED4Q96JG8 741 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 TEX37Q96LM6 180 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 GAL3ST4Q96RP7 486 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 NPAS2Q99743 824 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 DDX18Q9NVP1 670 aaKnown RBP20.68■□□□□ 0.9
LRRK1-208ENST00000532029 PRODH2Q9UF12 536 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 ITPR1Q14643 2758 aa20.68■□□□□ 0.9
LRRK1-208ENST00000532029 CROCCQ5TZA2 2017 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 A0A087WV62 115 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 C2orf92A0A1B0GVN3 265 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 K7EM74 188 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 PLOD2O00469 737 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 CFLARO15519 480 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 DPM1O60762 260 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 COQ9O75208 318 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 IFI6P09912 130 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 SOX18P35713 384 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 CDK9P50750 372 aaKnown RBP20.67■□□□□ 0.9
LRRK1-208ENST00000532029 ATP4BP51164 291 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 SEC24CP53992 1094 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 EBPQ15125 230 aaKnown RBP20.67■□□□□ 0.9
LRRK1-208ENST00000532029 IGFL2Q6UWQ7 119 aa20.67■□□□□ 0.9
LRRK1-208ENST00000532029 BEST3Q8N1M1 668 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms