RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 THRBP10828 461 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 FOSL2P15408 326 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ZNF26P17031 533 aaPredicted RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 DRD5P21918 477 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 PRKACGP22612 351 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 HNRNPA2B1P22626 353 aaKnown RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 PAX7P23759 505 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 PDHA2P29803 388 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 FCGR2CP31995 323 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 MATKP42679 507 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 IFNAR2P48551 515 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 SLC1A6P48664 564 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 PEX3P56589 373 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 GSCP56915 257 aaPredicted RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 CYCSP99999 105 aaKnown RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 CDKL1Q00532 357 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ZNF177Q13360 481 aaPredicted RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 ENPP2Q13822 863 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 KIAA0141Q14154 515 aaPredicted RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 USH1GQ495M9 461 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 UNC50Q53HI1 259 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 TCHHL1Q5QJ38 904 aaPredicted RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 ARHGAP11AQ6P4F7 1023 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 CBLN3Q6UW01 205 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 CES3Q6UWW8 571 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ZNF562Q6V9R5 426 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 USP43Q70EL4 1123 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 LHFPL4Q7Z7J7 247 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 TBC1D10CQ8IV04 446 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 AQP11Q8NBQ7 271 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ZNRF1Q8ND25 227 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 STKLD1Q8NE28 680 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 NFAM1Q8NET5 270 aaPredicted RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 OR1K1Q8NGR3 316 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 THRSPQ92748 146 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ATXN7L3BQ96GX2 97 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 C4orf36Q96KX1 117 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 NSMCE3Q96MG7 304 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 USP28Q96RU2 1077 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 TPPP3Q9BW30 176 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 RBM24Q9BX46 236 aaKnown RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 DGCR6LQ9BY27 220 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 RIBC2Q9H4K1 309 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 WDR76Q9H967 626 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 KCNK13Q9HB14 408 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 NMUR1Q9HB89 426 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 FGF22Q9HCT0 170 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 PALMDQ9NP74 551 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 NRN1Q9NPD7 142 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 AGPAT5Q9NUQ2 364 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 AATFQ9NY61 560 aaKnown RBP eCLIP2.49□□□□□ -2.01
CD44-234ENST00000531873 RDH8Q9NYR8 311 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 MBD2Q9UBB5 411 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 TUBGCP4Q9UGJ1 667 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 BAIAP2L1Q9UHR4 511 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ZNF580Q9UK33 172 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 IKZF3Q9UKT9 509 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 DUSP12Q9UNI6 340 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 LRP12Q9Y561 859 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 CUX2O14529 1486 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ATAD2BQ9ULI0 1458 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 RALGAPA1Q6GYQ0 2036 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 KDRP35968 1356 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 FBLL1A6NHQ2 334 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 K7EQG2 157 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 NR5A2O00482 541 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 FBP2O00757 339 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 IMPA2O14732 288 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 XPO1O14980 1071 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 MAPK13O15264 365 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ALOX15BO15296 676 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 INPP4BO15327 924 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 DUSP11O75319 330 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 ZNF821O75541 412 aaPredicted RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 SPAG6O75602 509 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 DUS4LO95620 317 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 OAS1P00973 400 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 SP1P08047 785 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ASNSP08243 561 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 IQCF3P0C7M6 154 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 EPB41P11171 864 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 CD1DP15813 335 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 AOC1P19801 751 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 DPP4P27487 766 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 PPP2R1AP30153 589 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 RFC2P35250 354 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ACADVLP49748 655 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 METAP1P53582 386 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 PPIAP62937 165 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 ZP4Q12836 540 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 CALCOCO2Q13137 446 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 SNTB2Q13425 540 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 EXOSC2Q13868 293 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 TMEM187Q14656 261 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 TRIP10Q15642 601 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 CDKN3Q16667 212 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 PARP6Q2NL67 630 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 LINC01620Q4KN68 170 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 RUSC1-AS1Q66K80 236 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 NIPAL3Q6P499 406 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms