RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 A0A1W2PR48 441 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 A8MUA0 341 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 E9PLN8 166 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 LSM1O15116 133 aaKnown RBP16.59■□□□□ 0.25
PTPN11-204ENST00000531326 PROM1O43490 865 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 CPN2P22792 545 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 SSTR2P30874 369 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 TIA1P31483 386 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTPN11-204ENST00000531326 HLCSP50747 726 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 TNFRSF17Q02223 184 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 ACSM2AQ08AH3 577 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 PDCD2Q16342 344 aaPredicted RBP16.59■□□□□ 0.25
PTPN11-204ENST00000531326 ACSM2BQ68CK6 577 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 C18orf63Q68DL7 685 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 KIRREL3Q8IZU9 778 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 APCDD1LQ8NCL9 501 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 FCRL1Q96LA6 429 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 VKORC1Q9BQB6 163 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 LRTM1Q9HBL6 345 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 PRDM9Q9NQV7 894 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 C1orf109Q9NX04 203 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 PHF11Q9UIL8 331 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 MCM8Q9UJA3 840 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 ITGB1BP2Q9UKP3 347 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 CLDN16Q9Y5I7 305 aa16.59■□□□□ 0.25
PTPN11-204ENST00000531326 PRRG2O14669 202 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 PCDH7O60245 1069 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 RFC3P40938 356 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 MEOX1P50221 254 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 MAPK12P53778 367 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 RGS9BPQ6ZS82 235 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 SULF2Q8IWU5 870 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 SCUBE1Q8IWY4 988 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 ZNF595Q8IYB9 648 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 ARFGAP2Q8N6H7 521 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 TM4SF18Q96CE8 201 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 METTL2AQ96IZ6 378 aaKnown RBP16.58■□□□□ 0.24
PTPN11-204ENST00000531326 MAGEB18Q96M61 343 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 C7orf26Q96N11 449 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 CCT7Q99832 543 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 SPOCK3Q9BQ16 436 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 DEFB126Q9BYW3 111 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 ENKD1Q9H0I2 346 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 SLCO1B3Q9NPD5 702 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 TEX10Q9NXF1 929 aaPredicted RBP16.58■□□□□ 0.24
PTPN11-204ENST00000531326 MS4A12Q9NXJ0 267 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 GIMAP2Q9UG22 337 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 ZNF223Q9UK11 482 aaPredicted RBP16.58■□□□□ 0.24
PTPN11-204ENST00000531326 MMACHCQ9Y4U1 282 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 HRH3Q9Y5N1 445 aa16.58■□□□□ 0.24
PTPN11-204ENST00000531326 ATP6AP2A0A1C7CYW4 349 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 TGFBR3LH3BV60 316 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 PRKRAO75569 313 aaKnown RBP16.57■□□□□ 0.24
PTPN11-204ENST00000531326 ATP6AP2O75787 350 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 AIFM1O95831 613 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 FAM76AQ8TAV0 307 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 UCN3Q969E3 161 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 TMEM125Q96AQ2 219 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 SDCCAG3Q96C92 435 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 C14orf79Q96F83 325 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 EBPLQ9BY08 206 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 PRTFDC1Q9NRG1 225 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 MARCOQ9UEW3 520 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-204ENST00000531326 MRPS33Q9Y291 106 aaKnown RBP16.57■□□□□ 0.24
PTPN11-204ENST00000531326 KLF13Q9Y2Y9 288 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-204ENST00000531326 POLR3HQ9Y535 204 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-204ENST00000531326 SPACA6W5XKT8 324 aa16.57■□□□□ 0.24
PTPN11-204ENST00000531326 C2CD3Q4AC94 2353 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 TRBV11-1A0A0K0K1C0 115 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 A0A1B0GTH9 108 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 FCHO1O14526 889 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 SEC22BO75396 215 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 NR2F6P10588 404 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 NR0B1P51843 470 aaKnown RBP16.56■□□□□ 0.24
PTPN11-204ENST00000531326 HK2P52789 917 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 HSD17B7P56937 341 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 TRA2BP62995 288 aaKnown RBP16.56■□□□□ 0.24
PTPN11-204ENST00000531326 RPL38P63173 70 aaKnown RBP16.56■□□□□ 0.24
PTPN11-204ENST00000531326 RFTN2Q52LD8 501 aaPredicted RBP16.56■□□□□ 0.24
PTPN11-204ENST00000531326 CMPK2Q5EBM0 449 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 NOXRED1Q6NXP6 359 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 MAVSQ7Z434 540 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 MDGA2Q7Z553 956 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 WDR75Q8IWA0 830 aaKnown RBP16.56■□□□□ 0.24
PTPN11-204ENST00000531326 MMP21Q8N119 569 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 MARVELD2Q8N4S9 558 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 POGLUT1Q8NBL1 392 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 B3GNT7Q8NFL0 401 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 C16orf52Q8NHV5 167 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 FAM57AQ8TBR7 257 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 C16orf78Q8WTQ4 265 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 ANKRD9Q96BM1 317 aaPredicted RBP16.56■□□□□ 0.24
PTPN11-204ENST00000531326 PPP3R2Q96LZ3 170 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 TREX2Q9BQ50 279 aaPredicted RBP16.56■□□□□ 0.24
PTPN11-204ENST00000531326 NUF2Q9BZD4 464 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 DLGAP4Q9Y2H0 992 aa16.56■□□□□ 0.24
PTPN11-204ENST00000531326 GNG14A0A1W2PPG7 69 aa16.55■□□□□ 0.24
PTPN11-204ENST00000531326 WASHC1A8K0Z3 465 aa16.55■□□□□ 0.24
PTPN11-204ENST00000531326 CLDN4O14493 209 aa16.55■□□□□ 0.24
PTPN11-204ENST00000531326 TFECO14948 347 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms